Prunus dulcis (almond): 117625862
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Entry
117625862 CDS
T07328
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul00900
Terpenoid backbone biosynthesis
pdul01100
Metabolic pathways
pdul01110
Biosynthesis of secondary metabolites
Module
pdul_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
117625862
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pdul01006
]
117625862
Enzymes [BR:
pdul01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
117625862
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
117625862
2.5.1.29 geranylgeranyl diphosphate synthase
117625862
Prenyltransferases [BR:
pdul01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
117625862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
117625862
NCBI-ProteinID:
XP_034213336
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All DBs
Position
4:complement(13837753..13838820)
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AA seq
296 aa
AA seq
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MAAVLRVSINPNVLANKMSRSNPSRPSRTTMAIMSQDHPYWASVHAEIEVHLKQHILVRP
PLSVFEPMHHLVFSAPPSPGPALCVAACELVGGHRDQAIAAAAALHLMHAAAVIHEQLLS
TDRLKTKPKPRPMVHSPGIELLTGDGMFAFGYELLAKSMDPAQNNSDRILRVIVEMTRAM
GSQGMVDGQYHEILMLCKQSRYYKYVCEKKEGGLHACGAACGAILGGASEEEIERLRRYG
LCVGVMIAFSNRVEERNEMETTEVVKELRSLALKELEFFHEGKAEAISSFLHLLNL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgtccttcgcgttagcatcaacccaaacgtattggcaaataaaatgtcaaga
tcaaatcctagccgtccatctaggaccacgatggccataatgtcgcaagatcatccttat
tgggcctccgtgcatgccgagatagaagtccatctcaagcagcacatccttgtcaggcct
ccactctcagtgtttgagcccatgcaccatttagtgttttctgccccgccaagccccggg
ccggctttgtgcgtggccgcgtgtgagctcgtgggcggccaccgcgaccaagccattgct
gcggcagctgccttgcacctcatgcatgctgcagctgttattcacgagcaacttttatca
accgataggctcaagaccaagcccaaacccaggcccatggttcacagtccagggatagag
cttctcactggagatggaatgtttgcatttgggtatgagttattggctaagtcaatggat
ccggcccaaaacaattcggaccggattttacgggttattgttgaaatgacacgtgccatg
gggtcacagggcatggtggatgggcaataccatgagatactgatgctgtgcaaacaatca
aggtactacaaatacgtgtgtgaaaaaaaggaaggtgggctccatgcatgtggggccgcc
tgtggggccatattaggaggtgcaagtgaggaggaaatagagagattgagaagatatggt
ctgtgtgtgggagtgatgatagcgttttcaaatagagttgaagaaagaaatgagatggaa
acaacggaagtggtgaaggagctcagaagtttggcactcaaggaactagaatttttccat
gaaggaaaggctgaggcaatttctagcttccttcatctcttgaatctttga
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