Prunus dulcis (almond): 117625945
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Entry
117625945 CDS
T07328
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul00040
Pentose and glucuronate interconversions
pdul01100
Metabolic pathways
Module
pdul_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117625945
Enzymes [BR:
pdul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
117625945
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
117625945
NCBI-ProteinID:
XP_034213439
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Position
4:19383754..19385504
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AA seq
392 aa
AA seq
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MAIPRSLIVLSLAFVFMINSALATAVTYNVASLGAKANGKTDSTKAFLSAWAKACASVKP
VVIYVPAGRFLLRNVVFSGPCKNNAITFRIAGTLVAPSNYRVIGNADNWIFFQHVNGVTI
SGGILDGKGTALWACKASGKSCPSGATTLGFSNSNNIKVSGLISLNSQMFHIVINGCHNV
KMDGVRVSASGNSPNTDGIHVQMSSGVTILNSKIATGDDCVSIGPGTSNLWIENVACGPG
HGISIGSLGKDQQEAGVQNVTVKTVTFTGTQNGLRIKSWGRPSTGFARNILFQHAVMINV
QNPIVIDQNYCPGKKGCPGQVSGVRISDVTYQDIHGSSSTEVAVKFDCSSKYPCSKIRLE
NVKLTYKNQVAVATCSHAGGTAAGMVQPTSCL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcaatccctcgaagcctaattgttctctcactagcctttgtgttcatgatcaactca
gccttggccactgcggttacatacaatgtggccagcttaggagccaaagcaaatggcaag
actgactccaccaaagccttcctctctgcatgggccaaagcttgtgcctctgtgaagcct
gttgtcatttacgttccggcagggaggttcttacttcgcaatgtggtattcagcgggcca
tgcaagaacaatgccatcaccttccgcattgctggaaccctcgtggccccatccaattac
agggtcattggaaatgccgataactggattttctttcaacatgttaacggggttacgata
tcgggtggaattcttgacggcaaaggcaccgccttgtgggcttgcaaggcctcgggcaag
agttgtcccagcggagcaacgacattgggtttttccaactccaacaacattaaggtgagt
ggcttaatatccctaaacagccaaatgttccacatagtcatcaacggctgccacaatgtg
aaaatggatggtgttagggtttcggcgtccggcaatagccccaacaccgatgggattcac
gttcaaatgtcatccggtgttaccatcctcaactccaagattgcaactggtgatgattgt
gtctcaattggccccggaacctcaaatttgtggatcgaaaatgttgcatgtggacccggt
catggaataagcattgggagtctaggcaaggatcaacaagaggctggtgtgcaaaatgta
acagttaaaacggttacttttactggtacccaaaacggtttaaggatcaagtcttggggg
aggccgagcactgggtttgctaggaacattctttttcaacatgccgtaatgatcaatgtc
caaaatccaattgttatcgaccaaaactattgccctggaaaaaaagggtgtcctggtcag
gtttctggagttcgaattagcgatgtgacataccaagacatccacggttcatcgtcaaca
gaagttgcagttaaatttgactgtagttccaagtacccttgcagcaagatcagattggag
aatgtgaaacttacttataagaaccaagttgctgtagctacatgtagccatgcaggtgga
acagctgcgggcatggttcaacctacaagttgtttgtag
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