KEGG   Prunus dulcis (almond): 117626021
Entry
117626021         CDS       T07328                                 
Name
(RefSeq) RNA-binding protein Y14
  KO
K12876  RNA-binding protein 8A
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03013  Nucleocytoplasmic transport
pdul03015  mRNA surveillance pathway
pdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117626021
  09122 Translation
   03013 Nucleocytoplasmic transport
    117626021
   03015 mRNA surveillance pathway
    117626021
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdul03019]
    117626021
   03041 Spliceosome [BR:pdul03041]
    117626021
Messenger RNA biogenesis [BR:pdul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     117626021
Spliceosome [BR:pdul03041]
 Complex C
  Other components
   EJC/TREX
    117626021
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 117626021
NCBI-ProteinID: XP_034213539
LinkDB
Position
4:17899208..17904859
AA seq 206 aa
MASADVETVDFDFQEDDLMDEEGAADAEPSASPRAPQPKLKSAITGVGASASPAAPKKTK
GRGFREDLNPDRNNRLAASDFDSLNSSDGLEPQRSVEGWIILVTGVHEEAQEDHLHNAFG
EFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAQAAISGMNEAALLTQILNVDWAFSNGS
FLDGSRKKTTRSLRERRSRSPPRRRY
NT seq 621 nt   +upstreamnt  +downstreamnt
atggcgagcgcagacgtagagaccgtggacttcgattttcaagaagacgatctcatggac
gaggaaggagccgccgacgcggagccctcggcttcccctagggccccacaacccaagctc
aagtccgcaatcaccggcgtcggcgcgtccgcctcacccgccgcccctaaaaagactaaa
ggtcgcggatttcgtgaagatctcaatcccgaccgtaacaaccgcctcgctgcctccgac
ttcgactccctcaactcctcagacggcctcgaaccccaacgatctgttgagggatggatt
attctggtcactggggtacatgaggaagcccaagaggatcatctacataatgcatttggt
gaatttggagagataaaaaatttgcatttaaatcttgatcgccgcactgggtttgtgaag
ggatatgcgctgattgaatatgagagttttgaagaggcacaagctgcgatatctggaatg
aatgaagctgcattacttacacagattcttaatgttgattgggccttcagcaatggatcc
ttccttgatggatccaggaagaagaccacaagatctctacgagaacgtcgttcgaggagt
ccccctaggaggagatactaa

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