Prunus dulcis (almond): 117626047
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Entry
117626047 CDS
T07328
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117626047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdul03021
]
117626047
03036 Chromosome and associated proteins [BR:
pdul03036
]
117626047
Transcription machinery [BR:
pdul03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117626047
Coactivators
SAGA/TFTC/STAGA complex
117626047
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
117626047
STAGA complex
117626047
TFTC complex
117626047
SAGA complex
117626047
SLIK complex
117626047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
117626047
NCBI-ProteinID:
XP_034213576
LinkDB
All DBs
Position
4:14518131..14524876
Genome browser
AA seq
539 aa
AA seq
DB search
MSNVPKEAIEVVAQSIGISNLSPDVALALTPDVEYRVREIMQEAIKCMRHSRRTVLTTDD
VDSALKLRNVEPIYGFASGDPLRFKRAAGHKDLFYIDDNDVEFKDVIEAPLPRAPLGVSV
TAHWLAIEGVQPAIPENAPIEALAAYSDVKKSEYKEDGIPVDIKLPVKHVLSRELQLYFE
KITELTRRSSSTLFKEALVSLATDSGLHALVPYFTCFIADEVTRNLNSFPLLFALMRLVR
SLLQNPHIHIEPYLQQLMPSVITCLVAKRLGNRYTDNHWELRNFTANLVSSICKRFGHVY
HNLQPRLTRTLLHAFLDPTKTLPQHYGAIQGLAALGPSVVRLLILPNLDSYMQLLEPEMI
LEKPKNEIKRHEAWRVYGALLKAAGQCMHDRLKMFHSLLSPPAHAIWKSKGRVATTMTNK
RKASTDNLMQQPPLKKLASDGTGGAMPMNSMQVDMQGAVGGFSSSVGGLNVGLPSMSHQL
PKEHMSGREVSGQMVKGSTVLAQAWKEETDAGHLLASLFEYFGESVFTFMPKSELSLFL
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgtgcctaaagaagcgatagaggtcgtagcacagagcattggcatttccaat
ttgtcccccgatgtcgcgcttgctctcaccccagatgtcgagtaccgggtccgagagatc
atgcaggaggcaattaaatgcatgcgacactcaaggcgaactgttctgactacagatgat
gtggatagtgcacttaaattaagaaatgtggagccgatatatggctttgcctctggagat
cctttgaggttcaagagagctgcgggacataaggatttgttctacatcgatgacaatgac
gtggaatttaaagatgtcattgaagcacctttaccaagagcacctcttggtgtatctgtt
actgctcactggctggcaattgaaggcgttcaacctgcaattccagaaaatgctcctatt
gaagcactagcagcatactctgatgtgaaaaaatctgaatacaaggaagatggaatccct
gtagacattaaattgcctgttaagcatgtactgtcaagggaacttcagctttactttgag
aagattacagagcttactcgcaggtctagttccaccctcttcaaagaagcattagtcagc
ttggcaacagattcaggactccatgcgttggttccttacttcacatgctttattgctgat
gaggttacaaggaatttgaatagtttccccctcctatttgctttgatgcgccttgtccgg
agccttcttcaaaatcctcacatacatattgaaccttatctacaacaattgatgccatct
gttattacctgccttgttgccaaaagattagggaatagatatactgacaatcactgggaa
cttagaaactttaccgcaaacctggtttcttcaatttgcaaaagatttgggcatgtttat
cacaatcttcaaccacgtttgacaaggactctgcttcatgctttcttggacccaacaaaa
acattacctcagcattatggtgcaattcaagggctagcagcccttggtcctagtgtggtt
cgtctacttatactaccaaatcttgattcgtatatgcaacttcttgaaccagaaatgata
ctagagaagccaaagaatgaaataaagaggcatgaagcttggcgtgtctatggggccttg
ctgaaagcggctggccaatgcatgcatgatcggctcaagatgttccacagtttgttgtct
cctccagctcatgccatttggaagagcaagggaagggttgcaacaacaatgacaaataaa
cgcaaagcaagcacagacaacttgatgcagcaaccaccactcaaaaaattagcttccgat
ggcacagggggagcaatgccaatgaactccatgcaagttgacatgcaaggggctgtaggt
ggattttcctcatctgttgggggtttaaatgttggtttaccatccatgtcacaccagtta
ccaaaggaacacatgtcaggaagggaggtcagtggtcaaatggtaaagggttctacagtt
cttgctcaggcgtggaaagaggagacggatgcaggacatttactggcatccctgtttgaa
tattttggtgaaagtgtgttcacctttatgcccaaatcagagttgtctcttttcctgtga
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