Prunus dulcis (almond): 117626187
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Entry
117626187 CDS
T07328
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117626187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdul03041
]
117626187
Spliceosome [BR:
pdul03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
117626187
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
BLOC1S3
Motif
Other DBs
NCBI-GeneID:
117626187
NCBI-ProteinID:
XP_034213732
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Position
4:513865..518089
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AA seq
566 aa
AA seq
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MNYKREHEDDARVNAEGFESDPKRQKRNGHSSPSSSPPPPASEGSLLPGFNYGDEDDEDN
QRRPPVDGYRGDGGDNQRDIKSGVEVEGEEEEDDDDDDDLEQGLYRRSREIEVRRDCPYL
DAVNRQVLDFDFEKFCSLSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLR
TEKVYCLPDGYEISDPSLDDIRHVLNPRFTEEQVEQIDKNKQWSRALDGSDYLPGMVGLN
NIKETDFVNVTIQSLMRVTPLRNFFLIPKNYQHCKSPLVHRFGELTRKIWHARNFKGQVS
PHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHADLRTSKKDSSIIYECFQGELEVV
KEIPKKGIEKKENGDDQNTDVVTENNGIVKERYKMPFLMLGLDLPPPPLFKDVMEKNIIP
QVPLFNILKKFDGETVTEVVRPRIARMRYRVTRLPQYLILHMQRFTKNNFFVEKNPTLVN
FPVKNLELKDYIPLSTPKENERLRSKYDLIANIVHDGKPGEGSYRVFVQRKSEELWYEMQ
DLHVSETLPQMVALSETYMQIYEQQQ
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaactataagagggaacatgaagatgatgctagagtgaacgcggaagggtttgaatct
gacccaaagaggcaaaaacggaatgggcattcatctccttcctcttcaccacctccacct
gcctctgaaggctcccttcttcctggttttaattacggcgatgaggatgacgaggacaac
cagagaaggccacctgttgatggctatagaggggatggtggtgataatcaaagggatata
aaaagtggggttgaagttgaaggagaagaagaagaagatgatgatgatgatgatgatctt
gaacaaggactttacaggcggagccgtgaaattgaggttaggagggattgtccatatctt
gacgctgttaatcgccaggttttggattttgattttgagaagttttgttctctgtctctg
tcaaatttgaatgtgtatgcatgtttagtttgtgggaagtattaccaaggaagagggaag
aagtcccatgcatatacacatagccttgaagctggacaccatgtttatatcaatcttcga
acggagaaagtatattgccttccggatggatatgaaatcagtgacccgtcattggatgac
attagacatgtcctaaacccaaggtttactgaggaacaagttgagcagattgacaaaaac
aagcaatggtctagggcacttgatggttctgattaccttcctggaatggtggggctcaat
aacattaaggagactgattttgtcaatgtcacaattcaatctttaatgagagtcactcca
ctaagaaacttcttcctcatccctaagaattatcaacattgcaagtctccgcttgttcat
cgatttggggagctcacgagaaagatatggcatgcacggaacttcaaaggacaggtgagc
ccacatgagttcctgcaggcagtgatgaaagccagtaagaaacggtttcgaataggagcg
caatctgacccagttgaattcatgtcatggctgcttaatacactgcatgcagatcttaga
acttcgaagaaagatagcagcatcatctatgagtgctttcagggggaactggaggttgtg
aaggagattcctaagaaaggtattgagaagaaagaaaatggtgatgaccagaatacagat
gttgtgactgaaaataatggcattgtcaaggaaaggtacaaaatgcctttcttaatgctt
ggattggatttgcccccaccacctcttttcaaagatgttatggaaaaaaatatcataccc
caggttccactgttcaatattttgaagaaatttgatggggagactgtgactgaagtggtc
cgacctcgcatagcaaggatgaggtatcgagtcacccgattaccgcagtatcttattctc
cacatgcagcgatttaccaagaacaacttctttgtggaaaagaatccgactttagtcaac
tttcctgtgaagaaccttgaattgaaagactacatccccttgtcaaccccaaaagagaat
gagagattgcgttcaaagtatgatttgatcgccaacattgttcatgatggcaaacctggt
gaaggttcatacagggtatttgtacagagaaagtcagaagaattatggtatgaaatgcag
gatcttcatgtttcagagactcttccccagatggttgccctttctgagacttatatgcag
atatacgagcagcagcagtaa
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