Prunus dulcis (almond): 117626200
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Entry
117626200 CDS
T07328
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdul03400
]
117626200
Enzymes [BR:
pdul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
117626200
DNA repair and recombination proteins [BR:
pdul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
117626200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
DExH14_plug
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
117626200
NCBI-ProteinID:
XP_034213747
LinkDB
All DBs
Position
4:1757385..1779569
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AA seq
2089 aa
AA seq
DB search
MLVQLPRLTSSLREPFDIDQAYLQRKLILQSQKPRQSSSSVDESELARKIVYRWEEASIE
VRQAYKQFIGAVVELIDGEVPSEEFCEVALTVYHLFGRPEEEDNVETNIAGKKLEVQKLL
GHAVSDANVRKVASLAQRLAGMQSSDKGTTVVSERPVNGTHDNVEFGSDLVFHAPARFLV
DVSLEDGELLGEESTGISSSYYEGLYSHGNLNDHHPSTDGRSFNLSWLKDACDQIVTKSS
SQLSRDELAMAICRVLDSDKPGDEIAGVLLDLVGDSAFETVQDLVSHRKELVDAIHHGLL
GLKSDKLSSSSQSRMPSYGTQVTVQTETERQIDKLRRKEEKRQRRGTEYGTDSELAAVNF
SSLLQASERKNPVDDLLALGEGPQSLAVSALPQGTVRKHHKGYEEVIIPPTPTAQMKPGE
KLIEITELDEFAQAAFRGYKSLNRIQSRIFHTVYYTNENILVCAPTGAGKTNIAMVSILH
EIGQHFKDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNMTVRELTGDMQLSKNEL
EETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVE
STQTMIRIVGLSATLPNYLEVAQFLRVNPEAGLFFFDSSYRPVPLAQQYIGISEQNFTAR
IELQNEICYKKVVESLRQGYQAMVFVHSRKDTAKTAQKLVELARKFEGLEYFKNDEHPQF
SLIQREVMKSRNKDLVALFEFGVGVHHAGMLRTDRGLTERLFSDGLLKVLVCTATLAWGV
NLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYY
LRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLNPLVYGIG
WDEVVADPSLSLKQRALIADAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVE
TYNEMLRRHMNETEVIDMVAHSSEFENIVVRDEEQNELETLVRSSCPLEVKGGPSNKHGK
ISILIQLYISRGSIDTFSLVSDAAYISASLARIMRALFEICLRKGWSEMSLFMLEYCKAV
DRQVWPHQHPLRQFDRDLSAEIVRKLEERGADLDHLYEMHEKDIGALIRYAPGGRLVKQY
LGYFPWIQLSATVSPITRTVLKVDLVITPDFIWKDRFHGTAQRWWILVEDSENDHIYHSE
LFTLTKRMAKGEPQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFYTISFQNLALPEAST
SHTELLDLKPLPVTSLGNSIYEALYKFSHFNPIQTQTFHVLYHTDNNVLLGAPTGSGKTI
SAELAMLRLFNTQPDMKVIYIAPLKAIVRERMNDWKRRLVSQLGKKMVEMTGDYTPDLMA
ILSADIIISTPEKWDGISRNWHSRAYVKKVGLMILDEIHLLGADRGPILEVIVSRMRYIS
SQTEREVRFVGLSTALANAGDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPR
MNSMNKPAYAAIGTHSPTKPVLIFVSSRRQTRLTALDLIQFATSDEHPRQFLSMPEEALQ
MVLYQVTDNNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPA
HLVIIKGTEYYDGKTKRYVDFPITDILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFL
YEPFPVESSLREQLHNHINAEIVSGTICHKEDALHYLTWTYLFRRLMFNPAYYGLDNTEP
EVLSSYLSRLVQNTFEDLEDSGCIKMNEDNVEPTMLGSIASQYYLSYMTVSMFGSNIGSD
TSLEVFLHILSAASEYNELPVRHNEENYNEALSERVRYKVDKDRLDDPHVKANLLFQAHF
SQLELPISDYITDLKSVLDQSIRIIQAMIDICANSGWISSSITCMHLLQMVMQGLWFDKD
SSLWMMPCMNVELADSLSKRGIFSVQQLLYLPKATLQTMIGNFPASKLYQDLQPFPRIEV
KLKLQQKDSGKSRSLDIRLVKTNFRQNKSRAFTPRFPKVKNEAWWLVLGNTSTWELYALK
RVSFSDHLVTHMELPSAPNTLQGMKLTLISDCYLGFEQEHSISELIQRQ
NT seq
6270 nt
NT seq
+upstream
nt +downstream
nt
atgttggttcagcttccgcgcctgaccagctctctcagagagccctttgacatcgaccaa
gcctatttgcagcgcaagctcatccttcagagccagaagcctcgccagtcttcgagctca
gtggatgagtcagagcttgcacggaagatagtttatagatgggaagaagcttcgattgaa
gtgcggcaagcttacaagcagtttattggggctgtggtggagttgatagatggagaagtt
ccatccgaagagttttgtgaggtggcactcaccgtgtaccatctttttggcaggccagag
gaggaagacaatgttgaaacaaatattgccggaaaaaagctggaagtgcaaaaactactt
ggtcacgccgtttcagatgctaacgtgcggaaagttgcctccctagcccagagacttgca
gggatgcagtccagtgataaggggactacagttgtttcagaaaggcctgtaaatgggact
catgacaatgtggaatttggttctgaccttgttttccatgcaccagctcgatttctggtg
gatgtttctttggaggatggcgagttattgggtgaggaaagcactggaatttcttcttca
tattatgaaggattatatagtcatggtaacttgaatgatcatcatccctctactgatgga
cgaagcttcaatttgagttggttaaaagatgcatgtgatcagatagtaacaaaaagtagt
tcgcagctttcccgagatgaactggctatggccatttgtcgggtgcttgactctgataaa
cctggtgacgagatagcaggtgtcttgttagatcttgttggggatagtgcatttgaaact
gttcaagacctcgtatcacatcgaaaggaacttgttgatgccatccatcatgggttactg
ggactgaaatctgacaaattgtcttcaagctctcaatcacgtatgcctagttatggcaca
caggttactgttcaaacagaaactgaacgacagattgataaacttcggcgcaaagaggaa
aagcgacaaagacgaggaacagagtatggcactgatagtgaactggctgctgtaaatttt
tcttctttactacaagcaagcgaaagaaaaaatcctgttgatgatctcttagcgcttggt
gaagggcctcaatctttagcagttagtgctcttcctcaaggaactgtgaggaagcatcat
aagggatatgaggaggtcattattcccccaacaccaacagcacaaatgaaacctggagaa
aagctgattgagataacggagttagatgaatttgctcaagctgcttttcgtggatataag
tctttgaaccgtattcagagccgcatatttcatactgtttattacactaatgaaaatata
ctagtttgtgctccaacaggagctggcaaaacaaacatagctatggtttctattctacat
gagattggacagcacttcaaagatggttacttgcacaaagatgaatttaagatagtttat
gttgcaccaatgaaggcattagctgcagaagttacatcaacttttagccatcgcttatct
ccattgaatatgactgtgagagaacttactggagacatgcaactttctaagaatgaactt
gaagaaactcagatgatagtcacaacacctgagaaatgggatgtcattactcgcaagagc
agtgacatgtcactttcaatgttggtgaagctcctaattattgatgaagtgcatctatta
aatgatgatagaggccctgtaattgaggcactagttgctcgaactttgcgccaggtggag
tctacacagacaatgatacgcattgtgggactttcagccactctaccgaactatttagag
gttgcacagtttctgagagtgaatccagaagcaggactcttcttctttgattctagttat
cgcccagtgcccctcgcacagcagtatattggtattagcgagcagaattttacagcccgt
attgaattgcagaatgagatatgctacaagaaggttgttgaatcactcaggcaaggttat
caggcaatggtattcgttcattctcgaaaggacacggcaaaaacagctcagaaattggtt
gaacttgctcgcaagtttgaaggactggagtattttaagaatgatgagcacccacaattt
tcgttgatccagagggaagttatgaagtccagaaacaaagatcttgttgcactttttgaa
tttggagttggagttcatcatgctgggatgttacgtactgatagagggctgactgagcgc
cttttctctgatggactgttgaaggtacttgtttgtacggcaactttggcatggggtgta
aatctaccagctcatactgttgtgataaaggggactcaattatatgatccaaaggctggc
gggtggcgagacctgggcatgctagatgttatgcagatctttggacgggctgggagacct
caattcgacaaaagtggtgaaggcattataattacatcccatgacaaactggcctactat
ttgcggttgctgacaagccaacttcctatagaaagtcagtttattagttccttgaaagac
aatttaaatgcagaggtggcacttggtactgtcaccaatgtcaaggaagcttgtgcatgg
cttggatatacgtaccttttcataagaatgaggctgaaccctttggtgtatggtattggg
tgggatgaggttgttgctgatccttccttgagtttaaagcaaagagctctcatagcagat
gctgcacgtgccctggacaaagcaaaaatgatgcgctttgatgagaaaagtggcaacttt
tattgtacagagcttggtcgaattgcaagccacttttatattcaatactcaagtgttgaa
acatacaatgaaatgttgagacgccacatgaatgagactgaggtaatagacatggtagcc
cactcttctgaatttgaaaatattgttgttcgagatgaggaacagaatgagctagagacg
ttggtgcgatcatcgtgcccattagaagttaaggggggtccttcaaataaacatggaaag
atatccattctcattcagttgtacatatctcgtggctcgattgataccttttcgttggtt
tctgatgctgcatacataagtgcaagcttggcacgcattatgcgggcattattcgagatt
tgtctacgaaaaggctggtctgagatgtcactgttcatgttggaatattgcaaggctgtg
gatcgccaagtttggccccatcagcatcctctcagacaatttgacagagatctttcagca
gaaatagtgcgaaagcttgaagaacgaggggctgacttagatcacctatatgagatgcat
gaaaaagacattggagcactgattcgctatgcacctggaggaaggttggtcaagcaatat
ttgggatattttccatggatccagttgtcagcaactgtaagtccaatcaccagaactgtt
ttaaaggtggatttggttattacaccagattttatatggaaagatcgttttcatggcaca
gcccagcgttggtggattctagttgaggattctgagaatgaccacatctaccactcggag
cttttcactctgacaaagcggatggcaaaaggagaacctcagaagctttcgttcactgtg
ccaatatttgagccacatccacctcagtattatattcgtgcagtttctgactcttggttg
catgcagaggctttctacaccatatccttccagaatctagcactgccagaggctagtact
tcgcacacagaattgctagatttgaagcctctccctgtgacttcacttggcaacagtatt
tacgaagcgttgtacaaattttcacactttaatccaatacaaacacagactttccatgtc
ctgtatcacacagacaataatgttctattaggagctcccactggaagtgggaaaactata
tctgctgagctcgctatgcttcgcctattcaatacccaacctgatatgaaggtaatttac
atagcacctttgaaggctattgttcgggaaagaatgaatgattggaaaagacgtcttgtc
tctcagctagggaaaaagatggttgaaatgaccggagattataccccagatttaatggcc
atattgtcagcggatatcataatatctactcctgagaagtgggatggtatcagtcgtaat
tggcatagtcgagcctatgttaaaaaggttgggcttatgatcttggatgagattcacttg
ttgggagctgaccggggacccatccttgaggttattgtgtcaaggatgagatacatatca
tcacagacagagcgtgaagtacggtttgtaggcctttctacagctttagcaaatgcaggg
gatttggctgattggctgggtgttggggaaatcggactcttcaatttcaaaccaagcgtg
agacctgtacctcttgaagtccatatccagggataccctggaaagttctattgcccaagg
atgaatagcatgaacaagccagcatatgctgcaataggcacccattcacctacaaaacca
gttttaatatttgtttcctctcgtcgacagacaaggcttactgcattggacctcattcag
tttgcaacatcagatgaacatccaaggcagtttcttagcatgccagaagaagccctacag
atggttctttatcaggtcactgataataacctgaggcacactttgcagtttggcattgga
ttacaccatgccggtctgaatgacaaagatagatctctggttgaggagctttttgcaaac
aacaaaattcaggtattggtttgtaccagcacattggcatggggtgtaaaccttccagct
catctggtcattattaagggaacagaatattatgacgggaaaacaaagagatatgttgat
tttccaatcacagatatcttgcaaatgatgggtcgtgctggccgcccacaatttgatcaa
catgggaaagcagtcattcttgttcatgaacccaaaaagagcttctataaaaagttttta
tatgaaccatttcccgttgagagcagtctgagggaacagttgcacaatcacatcaatgct
gagatagtttctggcacaatttgccataaagaggatgcgttgcattatcttacctggaca
tatttatttcgtagactgatgtttaatccagcttactatggcttggacaatactgaacct
gaagttctcagctcttatttgtctaggttagtgcaaaacacatttgaggatctggaagac
agtggatgcattaagatgaatgaagacaatgtagagccaacgatgctgggttcaatagca
tcccagtattatcttagctacatgactgtatcaatgtttggttcaaacataggatcagat
acatcgcttgaagtcttcttgcatatcctatctgctgcttcggaatataacgaacttcct
gtgcggcataacgaggagaattacaatgaagcattgtctgagagagttcgatataaagtg
gataaggaccgcttagatgatccacatgtcaaagccaatctgctatttcaggcacatttc
tcgcagttagaattaccaatcagtgattacatcacagacttgaagtcagtattggatcaa
agtatacgaatcatccaggccatgatagatatatgtgctaacagtgggtggatttcaagc
tcaattacttgcatgcatcttctgcaaatggtcatgcagggtttatggtttgataaggat
tcttccttatggatgatgccgtgcatgaatgttgaacttgctgactcgctaagcaaaaga
ggaatattcagcgtacagcaactattgtatctccccaaggcaactttgcagaccatgatt
ggaaattttcctgcttcaaaattgtatcaggatctgcagccttttccacgcatcgaagtg
aaattaaaacttcagcaaaaggacagcggaaagtctcgctctttagacatcagactggtg
aagaccaatttcaggcaaaacaaatcaagagcatttaccccgcgtttccctaaggtgaaa
aacgaagcatggtggttggtccttgggaacacctcaacatgggaattatatgctctgaaa
agagtatctttctctgatcacttggttactcacatggagttaccatcagctcctaatact
ctccaggggatgaaattgactttaatttcagattgttatctgggcttcgagcaagagcat
tctatttcagagcttattcaacggcagtaa
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integrated database retrieval system
