KEGG   Prunus dulcis (almond): 117626544
Entry
117626544         CDS       T07328                                 
Name
(RefSeq) protein SMG7
  KO
K14409  protein SMG7
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    117626544
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdul03019]
    117626544
Messenger RNA biogenesis [BR:pdul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     117626544
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117626544
SSDB
Motif
Pfam: EST1_DNA_bind EST1
Other DBs
NCBI-GeneID: 117626544
NCBI-ProteinID: XP_034214170
LinkDB
Position
4:19961836..19969452
AA seq 1012 aa
MITRMDKMSAPSSRERAQRLYDKVIELENRRRRSAQARIPSDPNAWQQIRENYEAIILED
HVFSEQHNVEYALWQLHYKRIEELRAHFSAATASAGSNSSQAVKGPARPDRITKIRLQFK
TFLSEATGFYHDLIVKIRAKYGLPLGYFSEDSENKIVMDKDGKKSTEMKKGLISCHRCLI
YLGDLARYKGLYGEGDSKTREYAAASSYYLQAASLWPSSGNPHHQLAILASYSGDELVAV
YRYFRSLAVDSPFSTARDNLIVAFEKNRQSYSQLPGNTNASAVKELPARLTSKGRGKAEA
IPASKDNNTEVSLVKEKASSTQETYKAFCIRFVRLNGILFTRTSLETFVEVLSVVSSGLC
ELLSSGAEELQNFGADSVENGLFIVRLVSILIFTVHNVKKESEGQTYAEIVQRAVVLQNA
FTAVFELMGHILERCVQLCDPSSSFLLPGILVFVEWLACCPDVAAGSDADEKQTKVRSKF
WMVCISFLNSISSTGPVSIDDDEDETCFNNMSRYEEGETENRLALWEDFELRGFIPLLPA
QTILDFSRKHSFGSDGHKEKGARVKRIVAAGKALANVIKVDQKAVYFDSKAKKFVIGFEP
PVQNDFVPTSYMGMATENDNLQENQAENTMKLGVAYPKPELTMEGDEEDEVIVFKPIVAE
KRPDVVNTTWAAYEGLVPGKNASPGDLKVNGTYVTAPFDNLRQQTAFSAGSQIPVSVGNG
IPQHLQSIQSHASKLSMEAGFGASSQLPVSVANSIPQNLQPTQSHALKLSTEEEISLAHG
LKSMGFMGNGYVLASEPVAVSVPFQQPVNGSTSGMVYSHTKAPEAMLPFKVDTMSSSGAI
ADGLTVKTSSNLPTGIRKNPVSRPVRHLGPPPGFSPVPPKNVNESIYGSDSMSENLLMDD
YSWLDGYQMPSSTKGNGLNSSINISSHSNPNRFINSNGLNGPVNFPFPGKLGPPMQLQGE
KQKSWQDFQMLDELKLHHEMQLQQQLVNGNQHLTPQPEQYQGQSVWTGRYFV
NT seq 3039 nt   +upstreamnt  +downstreamnt
atgattacacgtatggataaaatgtcagctccttcatcaagggagcgtgcccaacgcctc
tatgacaaggttattgaattggagaataggcgtaggaggtctgctcaagctcgaattccc
tcagatcccaatgcctggcaacagatacgggagaattatgaagcaataattctcgaggat
catgttttttctgagcagcacaatgttgagtatgctttgtggcagctgcattacaagcgt
attgaggaattgagagcacactttagtgctgctacggcttctgcaggttcaaactcatct
caggctgtgaagggccctgctcggcctgatcggattacaaaaataagattgcagtttaaa
acattcctttcagaggcaactggattttatcatgatttgatagtgaagatcagagcaaag
tatgggctccctcttgggtatttctctgaggattctgaaaataaaattgttatggacaag
gatggaaagaaatctactgaaatgaagaaaggcctgatatcgtgccaccgatgtttgatc
tacttgggtgatcttgcacgctacaaaggattgtatggggagggggactccaaaactcgt
gagtatgctgcagcctcaagttactacttgcaagctgcatctctctggccatcaagtggg
aatccccatcatcagcttgctattttggcatcctattcgggggatgagttggtggctgtt
tatcgatattttcgtagcctggcggtggatagtcccttttcaactgcaagggataacttg
attgttgcatttgagaagaatcgtcagagttactctcaactgcctgggaatactaatgct
tctgcagtcaaagagttgcctgcacgattgacaagcaaaggtagagggaaagcggaagca
atacctgcatctaaagataacaatacagaagtgagccttgttaaggaaaaagcatccagt
actcaggaaacttataaggctttttgcatacggtttgtccgtctaaatgggattcttttc
acacgtactagcctggagacatttgtagaagttctttctgtggtaagcagtggtttatgt
gagctcctgtcttctggagcagaggagttgcagaatttcggtgcagattctgttgagaat
ggacttttcattgttagacttgtctccatattgatattcacagttcacaatgtgaagaag
gaaagtgaaggtcagacatatgctgaaattgtacaacgtgctgtcgtactgcagaatgca
tttactgctgtctttgagttgatggggcacatcttagagagatgcgtccagttgtgtgat
ccttcttcaagtttcctgttaccgggtattctggtgtttgtagaatggttagcatgttgc
ccggatgttgcagctggaagcgatgcagatgaaaaacagactaaagttagatcaaagttc
tggatggtttgcatctccttcctgaatagtatctcatcaacagggccggtgtccatagat
gatgatgaagatgagacttgctttaataatatgagcagatatgaagaaggggaaactgag
aaccgtcttgctttgtgggaggattttgagttgagaggattcattccacttcttccagcg
caaactatattggacttctcaaggaagcattcttttggaagtgacggccacaaggaaaaa
ggggcccgtgttaaacggattgtggcggcaggcaaggctcttgcaaatgtgattaaggtt
gaccagaaagcagtatattttgattcgaaggcaaagaaatttgtcattggttttgagcct
ccagtgcaaaatgattttgttcctacctcctatatgggcatggctactgaaaatgataat
cttcaagaaaatcaagcagagaatacaatgaagttgggagttgcatatccaaagcctgag
ttaaccatggaaggggatgaggaagatgaagtaatagtttttaagccaatagtggctgag
aagcggcctgatgtggtaaacactacttgggcagcctatgagggcctggtgcctggtaaa
aatgcttctccaggtgatcttaaagttaatggcacttatgtcactgccccttttgataat
cttcgccagcaaaccgcttttagtgctggttcacaaatacctgtatctgttggtaatggt
ataccccaacatttgcaatcaattcagtcacatgcttccaagctgtcaatggaagctggt
tttggtgctagttcacaacttcctgtatcagttgctaatagcatcccccagaatttgcaa
ccaactcaatcacatgctttgaagttgtcaacagaggaagaaatatctcttgctcacggc
ttaaagagtatgggatttatggggaatgggtatgtacttgcatctgagcctgtggcagtt
tcagttccattccagcagccagtgaatggtagtactagtggtatggtctacagccacaca
aaagctccagaagctatgttgccgtttaaggttgatactatgtcatcttctggagcaatt
gctgacggtttgactgtaaagacatcatctaacctgcccacaggtatccgaaagaatcca
gtaagtcgacctgttaggcatcttggtccaccacctggttttagccctgttcctcccaaa
aatgtgaatgaatcgatttatggctccgactcaatgagtgagaatctactgatggacgat
tacagctggttggatggatatcagatgccatcttcaacaaaaggaaatgggctcaatagc
tccattaatatctcatctcattcaaatcccaatcgcttcattaacagcaatggcttgaat
gggccagtgaactttccctttcctggtaaactgggtccacctatgcaactccaaggcgaa
aaacagaaaagctggcaagattttcagatgctcgatgagctcaaactacaccatgaaatg
cagctgcagcaacaacttgtaaatggaaatcagcacttgactcctcagcctgagcaatat
caaggacagtctgtctggacaggccgttattttgtgtga

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