Prunus dulcis (almond): 117626592
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Entry
117626592 CDS
T07328
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117626592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117626592
03110 Chaperones and folding catalysts [BR:
pdul03110
]
117626592
03029 Mitochondrial biogenesis [BR:
pdul03029
]
117626592
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdul04147
]
117626592
Enzymes [BR:
pdul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
117626592
Messenger RNA biogenesis [BR:
pdul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
117626592
Chaperones and folding catalysts [BR:
pdul03110
]
Heat shock proteins
HSP60 / Chaperonin
117626592
Mitochondrial biogenesis [BR:
pdul03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
117626592
Exosome [BR:
pdul04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117626592
Exosomal proteins of other body fluids (saliva and urine)
117626592
Exosomal proteins of breast cancer cells
117626592
Exosomal proteins of colorectal cancer cells
117626592
Exosomal proteins of bladder cancer cells
117626592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
TAL_FSA
Motif
Other DBs
NCBI-GeneID:
117626592
NCBI-ProteinID:
XP_034214231
LinkDB
All DBs
Position
4:6482194..6487003
Genome browser
AA seq
586 aa
AA seq
DB search
MSVSFTSAQLFFHKPLFSLQSLFVKQRAPGFWRRPQALRSLVVRAGPKKISFGTESREAL
QAGIDKLADAVSLTLGPKGRNVVLSESETLKVINDGVTIVQSIELSDTIENVGAMLIQEV
ASKMNSLAGDGTTTAIILTREMIKGGLLAVAFGANPISLKKGMDKTLNELVKVLKKKSLP
VKGRKDIKAVASISAGNDEFIGNLIAEAIDKIGPDGVISIESSSSFETSILVEEGLKFDK
GYMSSHFITNQERSVVEFDKAKVLVTDQKISTVKEIVPLLEKTTQLSIPLLIIAEDISKQ
VLETLVVNKMQGLLNVAVVKCPGFGEGKKALLQDIALMTGADFLSGDFGLTLESATSDQL
GVARRVTITSNSTTIVADPSTKAEIQARILQIKKDLAETENAYLSRKLSERIAKLCGGVA
VIKVGAHTEVELEDRKLRIEDAKNATFAAMEEGVVPGGGATYVHLSEFIPVIKNSMEDTD
EQIGADLVAKALLAPAKSIATNAGDDGEVVVEKTKSCDWRVGYNAMNGSYEDLPDAGVID
PCRVSRCALQIAVSIAGVVLTTQAVLVEKTRKKKPAVPFVPGITPQ
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtctccttcacttccgctcaactcttctttcacaaacctctcttctctctgcag
agcctttttgtgaagcaacgagcacctgggttttggagaagaccacaggctttgaggagt
cttgtggtcagagcaggcccaaagaagatatcttttggtacagaaagcagggaggcctta
caagctgggatagataagcttgctgatgctgtttctctgaccttaggacctaaaggacgt
aatgttgttctttctgagtctgaaacactgaaagtgattaatgatggtgtaacaattgtt
caatccatagagctatcagatacaattgagaacgtcggagcaatgctaatccaagaggtt
gcaagtaaaatgaatagtttggctggtgatggtaccaccacagcaatcattttgacaaga
gaaatgatcaaaggtggactgttggcagtagcttttggggcaaacccaatttctttgaag
aaaggaatggataagactctgaatgagttggtcaaggtcttgaagaagaagagtcttccc
gtaaaaggaaggaaagatattaaagctgtggcctcaatttctgctggaaatgatgaattc
atagggaacttgattgctgaagctattgataagattggccctgatggagtaatctcaatt
gagtcatcctcatcatttgaaacgtctattttagttgaagaaggactgaagtttgacaag
gggtacatgtcctcccacttcattaccaaccaggaaagatctgttgtggagtttgacaaa
gctaaggtcctagtaactgatcaaaagatttctactgttaaagaaattgttcctttactg
gaaaagacaacccaattgagtatcccgctactaatcattgcagaggatatctcaaagcaa
gttctggaaacattagtggtgaacaaaatgcagggtttacttaatgttgctgttgttaaa
tgtcctggatttggagagggaaagaaagctcttttgcaagatattgcactcatgacaggt
gctgattttctctctggagattttggtctgacccttgaaagtgcaacatcagatcaactt
ggagttgcaagaagagtgacaataacaagtaattcaacaacaatagttgctgacccttct
actaaagccgagattcaggcaagaatattgcagatcaagaaggatctggcagaaacagaa
aatgcatacctgtcgagaaagctctctgaaagaattgccaaactttgcggtggagttgcc
gtaattaaggtaggagcacatactgaggtggaacttgaagatcgcaaactcagaattgag
gatgcaaagaatgctacatttgctgctatggaggaaggggtggtgcctggtggcggcgca
acatacgtacatctgtccgaattcattcctgtcataaagaattctatggaagatacagat
gagcagataggtgctgaccttgtggcgaaggctctacttgctcctgcaaaatcaattgca
actaatgcaggggatgatggagaagttgttgtggagaagacgaaaagttgtgattggaga
gttgggtacaatgcaatgaatggcagttatgaagatcttccagatgcaggagttatagat
ccttgtagggtttcaagatgtgcccttcagattgcagtctccattgctggggtggttctt
acaactcaagctgtattggtggagaaaacgaggaagaaaaagccagctgttccttttgtt
cctggaataactcctcagtga
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