Prunus dulcis (almond): 117626674
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Entry
117626674 CDS
T07328
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase isoform X1
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul00240
Pyrimidine metabolism
pdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
117626674
Enzymes [BR:
pdul01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
117626674
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Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Uma2
DUF5338
Motif
Other DBs
NCBI-GeneID:
117626674
NCBI-ProteinID:
XP_034214365
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Position
4:complement(18677277..18684227)
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AA seq
344 aa
AA seq
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MASSSSALSRLSNLRGHLHPSHSNKGGVGFIKISPEVSEALSNGYAVVALESTIISHGMP
YPKNLETAREVEAVVRENGAVPATIAILDGIPCVGLSMEELEKLANLGPRAQKTARRDIA
HVVATGGNGATTVSATMFFASMVGIPLFVTGGIGGVHRHGEHTMDISSDLTELGRTPVAV
ISAGVKSILDVPRTLEYLVCTKLSHVYDCKTNEFPAFFSETSGCKVPCRIDTPEDCAQLI
DANLKLELGTGILIAVPIPKEHAASGRLIESAIKRALEEARDKNIIGNAATPFLLARVNE
LTGGASLASNIALVKNNALVGAKISVALAQIKERENKGGVKTTL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcttcttcggctctctcaagactctctaatctccgcggacacttacatccc
tcccactcaaataagggtggtgtggggtttatcaagatttctccagaggtttctgaagct
ttgtcaaatggctatgctgttgttgctcttgaatccaccattatttcccatgggatgccc
tatcctaagaacttggaaaccgcaagggaagttgaggcagttgtgagggaaaatggagct
gttcctgccacgattgctattttggatggcataccttgcgtaggtctgagtatggaagaa
ctggagaagcttgccaatctcggacccagagctcagaagacagctcgaagagacattgca
catgttgtggcaaccggagggaatggagcaactactgtttctgcaaccatgttttttgct
tctatggttggcataccattgtttgttactggagggattggaggagtacatagacatgga
gagcatacaatggacatatcttctgatcttactgagcttggaaggacaccagtagctgtc
atctctgctggtgtaaaatcaatattggatgtcccaaggacccttgaatatttggtctgc
actaaactatctcatgtatatgattgcaagaccaatgaatttccagcatttttctctgaa
acaagtggttgcaaggtgccttgccgtatagataccccagaagactgtgctcagcttata
gatgcgaacctgaaacttgagcttggaactggaattttgattgctgttccaattcccaaa
gagcacgcagcgtctggaaggttaattgagtctgcaataaagagagctcttgaagaagct
agggataagaacataattggaaatgctgcaactccatttttgcttgcgagagtgaatgaa
ttaactggaggagcttctctggcttcgaacattgcactggtgaagaacaatgcacttgtt
ggtgctaaaatttccgtagcacttgcgcagattaaagaacgtgaaaataaaggtggtgtg
aagacgacgctatag
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