KEGG   Prunus dulcis (almond): 117626941
Entry
117626941         CDS       T07328                                 
Name
(RefSeq) coatomer subunit alpha-1
  KO
K05236  coatomer subunit alpha
Organism
pdul  Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pdul04131]
    117626941
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pdul04147]
    117626941
Membrane trafficking [BR:pdul04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    117626941
Exosome [BR:pdul04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   117626941
  Exosomal proteins of bladder cancer cells
   117626941
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 EIF3I WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 TPR_COPA_B Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_WDR41 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_WDR19_1st TPR_2 Beta-prop_RIG_2nd TPR_19 Zn_ribbon_19 Aa-Ago_N ThaI zf-CHCC
Other DBs
NCBI-GeneID: 117626941
NCBI-ProteinID: XP_034214662
LinkDB
Position
5:complement(16927928..16934530)
AA seq 1218 aa
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGSLKKKTVSPADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPNLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGIQTFRREHDRFWILSSHP
EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYHEFSTQRDTQVIPIRRPG
STTLNQSPRTLSYNPSENAVLICSDLDGGSYELYLIPKDSISRGDSMQDAKRGVGGSAVF
MARNRFAVLDKSNNQVLIKNLKNEVVKRSVFPFAVDAIFYAGTGNLLCRAEDRVSIFDLQ
QRIVLGELQTPFIKYVVWSNDMESVALLSKHAIIIASKRLVHQCTLHETIRVKSGGWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIVIDATEYI
FKLSLFKKRYDHVMSMIRSSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASATAIDEKDYWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFLYLVTGNMEKLSK
MLKIAEVKNDVMGQFHNALYLGNVQERIKILENVGHLPLAYITASVHGLHDVAERLSAEL
GENVPTLPQGKVPTLLMPPTPVMCGGDWPLLRVMRGIFEGGLDNIGRGAADEEDEAADGD
WGEELDMVDVDGLQNGDVTAVLEDEEVAEGNEEGGGWDLEDLELPTEADTPRASVNSNSS
VFVAPTIGMPVSQIWIQRSSLAAEHAAAGNFDTAMRLLNRQLGIKNFAPLRPMFLDLHTG
SHSYLRAFSSTPVISLAVERGWNESATPNVRGPPALVFNFSQLEEKLKAGYKATTAGKLT
EALRLFLGILHTIPLIVVDSRREVDEVKELIIIVREYVLGLQMELKRREIKDNPVREQEL
AAYFTHCNLQMPHVRLALVNAARICFKAKNFATAANFARRLLETNPTIEIQAKTARQVLQ
GAERNMTDASQLNYDFRNPFVTCGATYIPIYRGQKDVSCPYCSSRFVPTQEGLLCTVCDL
AVVGADASGLLCSPTQVR
NT seq 3657 nt   +upstreamnt  +downstreamnt
atgttgaccaagtttgaaacgaagagtaatagagtgaagggactgagcttccacagtaag
agaccgtggatcctcgcaagtcttcacagtggtgtgatccagctatgggactaccgtatg
gggactctcattgatcgattcgacgagcatgatgggcccgttcgcggtgtccacttccac
aaatctcagcctctctttgtgtctggaggggatgattataagatcaaagtttggaactat
aagatgcataggtgtctttttacacttcttgggcaccttgattatattcgtaccgtgcag
tttcaccatgagtacccatggattgttagtgccagtgatgaccagaccattcgtatatgg
aactggcagtcacgtacttgcatttcagttttgacaggccacaatcattatgtcatgtgt
gcctcattccatcctaaagaagaccttgttgtatctgcctccttagatcagactgtccgt
gtttgggatattggttccctcaagaagaagactgtatcccctgcagatgacatactacga
ctaagtcagatgaatacagatctttttggtggtgttgatgctgttgttaagtatgtcttg
gaagggcatgatcgaggtgttaattgggcttcattccatccgaacctacctttgattgtc
tcaggcgcagatgatcgccaagttaaattgtggcggatgaatgatacaaaggcttgggaa
gtggacacactgagagggcacatgaataatgtttcatgtgttatgtttcatgccaaacag
gacataattgtatcgaactcggaagacaaaagtatccgtgtttgggacgtaacaaagcga
actggaattcaaactttccgacgagagcatgaccgtttttggattctttcatctcaccct
gaaatgaatctgttggctgcaggtcatgacagtggcatgatcgtatttaagttggagagg
gaacgtccagcctttgcagtgagtggtgattctctgttctatgctaaggatcgcttcttg
cgataccatgagttttcaacccaaagggacacacaagttattccaattcgacgccctggt
tccaccactttaaatcaaagtccgaggactctttcttacaatccttcagaaaatgcggtt
cttatttgctcagacttggacgggggatcttacgaattgtatttgatacccaaggacagc
attagtaggggtgacagtatgcaagatgcaaagagaggtgttggaggttcagctgtgttt
atggcacgaaataggtttgctgtgcttgacaaaagcaacaaccaagtcttgattaagaat
ttgaaaaatgaggttgttaaaaggagtgtttttccttttgctgttgatgcaatattctat
gccggaacaggtaatttgctgtgtagggcagaggacagagtgtctatatttgacctccag
cagaggattgttcttggtgagcttcaaacccccttcatcaagtatgttgtttggtccaat
gacatggaaagtgttgccttgctcagcaaacacgccattattattgctagcaagaggctt
gtgcaccagtgtactcttcatgagacaatccgtgtaaagagtggtggctgggatgacaat
ggtgttttcatttacacgactctaaatcacataaaatattgtctccctaatggagatagt
gggataatcagaaccctagatgttcctatatacattacgaaggtttctggaaataccata
ttttgcttggatcgggatgggaaaaacagagccatagttattgatgccaccgaatacatt
ttcaagttatccctgtttaagaagcggtatgaccatgttatgagcatgataaggagctca
cagctctgtgggcaggcaatgattgcttatctgcaacagaaggggttccccgaagtggct
ctccattttgtgaaagatgaaagaaccagattcaatctggccctagagagtgggaatatt
caaattgcagtggcatccgctacagcaattgatgaaaaagattactggtataggttgggg
gtggaggctcttcgtcagggcaatgcaggtattgtggagtatgcctaccagaagactaaa
aattttgagaggctatctttcctttatctcgtaactggtaatatggaaaagctgtcaaag
atgctgaaaattgctgaggttaagaatgatgtcatgggtcagttccacaatgcactgtat
ctaggcaatgtccaggagcgtattaagatcttggagaatgttggccacttaccccttgct
tacatcacagcttcagttcatggcctacatgatgttgctgaacggctatccgctgagttg
ggagaaaatgttccaaccttgccccaggggaaagtacccactcttttgatgcccccaacg
ccagttatgtgtggtggtgattggcctcttcttagagtcatgagaggtatatttgaaggt
gggttggataatattggcaggggtgctgcagatgaagaggatgaggctgctgatggtgac
tggggtgaggagctggacatggttgatgttgatggcttgcaaaatggagatgtcactgct
gtattggaagatgaggaagtggctgaaggaaatgaggaagggggaggatgggaccttgaa
gatttggagctccccactgaagcggacacaccaagggcttctgttaattctaattcatca
gtttttgttgctccaactattggcatgcctgtaagccagatttggatccagagatcttct
cttgctgctgaacatgcagcagcaggaaattttgatactgcaatgcgcttgctgaacagg
caacttggaatcaaaaactttgctcccttgagacccatgtttcttgatcttcacactggc
agccacagctatctacgtgcattttcatctactccagtgatatcacttgccgttgagcgt
gggtggaatgaatctgctaccccaaatgtgagaggcccgccagcacttgtgttcaatttt
tctcagttggaagagaaactcaaagctggttacaaggctacaacagctgggaagttaact
gaagctcttaggctcttccttggcattcttcacacaattcctttgattgttgttgattca
aggagggaagttgatgaagttaaggagttaattataatagtgagagagtatgttctggga
ttgcaaatggagctgaagagaagggaaattaaagataatccagtacgtgaacaggagctt
gcagcttatttcacacactgcaatcttcaaatgcctcacgtaaggcttgcattggttaat
gctgcgagaatttgcttcaaggcaaagaactttgccactgcagctaactttgccaggcgg
ctattggaaaccaaccccaccatcgagattcaagcaaagacagccaggcaagtgctgcaa
ggagcagagaggaatatgactgatgcctctcaactgaattatgatttcagaaacccattt
gtgacttgtggggcaacatatataccaatttaccgaggacagaaggatgtctcttgcccg
tactgtagctcacggtttgtgccaacccaagaagggctgctctgtactgtttgtgatctt
gcagtggttggggcagatgcttcagggttgctatgttctcctactcaggttcgatag

DBGET integrated database retrieval system