Prunus dulcis (almond): 117627013
Help
Entry
117627013 CDS
T07328
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul00040
Pentose and glucuronate interconversions
pdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117627013
Enzymes [BR:
pdul01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
117627013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
117627013
NCBI-ProteinID:
XP_034214773
LinkDB
All DBs
Position
5:complement(13573702..13575888)
Genome browser
AA seq
413 aa
AA seq
DB search
MARPSSGPSPLSLLSFLLFCLLTPTLIASRPLQQNPELVVQDVQRSINDSVSRRNLGYLS
CGTGNPIDDCWRCDPNWEQNRQRLADCAIGFGKNAIGGRDGKIYVVTDSGDNDPVNPKPG
TLRHAVIQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITVQFVTNII
IHGLHIHDCKQGGNAMVRSSPEHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCKDGLVDA
IHGSTAITISNNYMTHHDKVMLLGHSDSYTEDKNMQVTIAFNHFGEGLVQRMPRCRHGYF
HVVNNDYTHWEMYAIGGSANPTINSQGNRFAAPDIRFSKEVTKHEDAPESEWRNWNWRSE
GDLMINGAFFTASGAGASSSYARASSLGAKPSSLVGSITTASGALSCRKGSRC
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggccctcctcaggcccctcacctctctctctcctcagcttcctcctcttctgt
ctcctcaccccaaccctcattgcctccagaccactgcagcaaaaccctgaattggttgta
caagatgtacaaaggagcatcaatgactctgtttctaggaggaacttgggctacttgtca
tgtgggactggaaaccccattgatgattgctggcgatgtgacccaaattgggagcagaac
aggcagaggctggcagattgcgcaattgggtttgggaaaaatgccattggtggaagagat
ggcaagatttacgtggtgacggattcaggggataacgaccctgtaaacccaaagccaggg
actctacgacatgccgttattcaggacgagccactgtggatcatcttccagcgtgatatg
acaatccaactgaaggaagagctgatcatgaactctttcaagaccatcgacggtcgagga
gccagcgtgcacattgctggtgggccatgcatcaccgtccaatttgtgaccaacattatc
attcatggtctgcacatacacgattgcaagcagggagggaatgctatggtgcggtcctcc
ccagagcactacgggtggaggactatatccgacggtgacggtgtgtccatcttcggtggg
agccacgtgtgggtggaccattgctctttgtcaaattgcaaagatgggttggttgatgca
attcatgggtccactgccataacaatttcgaacaattacatgactcaccatgacaaagtg
atgttgcttgggcatagcgattcttataccgaagataagaacatgcaagtcaccatagcc
ttcaatcactttggagaaggtttggtccagagaatgccaagatgtaggcatggatatttc
catgtggtgaacaatgactacacccattgggagatgtatgccattggaggcagtgccaac
cctacaatcaatagccaagggaatagatttgctgcaccagatatcagatttagcaaagag
gtgacaaaacatgaagatgcaccagaaagtgagtggaggaattggaattggaggtctgaa
ggagacttgatgataaatggtgcattttttacagcatcaggagctggagcttcctcaagc
tatgcaagggcttcaagcttgggggcaaagccatcttctctagtgggttcaataaccaca
gcttctggtgcacttagctgcagaaagggttctcgttgctga
DBGET
integrated database retrieval system
