KEGG   Prunus dulcis (almond): 117627021
Entry
117627021         CDS       T07328                                 
Name
(RefSeq) cyclin-dependent kinase D-3
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03022  Basal transcription factors
pdul03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    117627021
  09124 Replication and repair
   03420 Nucleotide excision repair
    117627021
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:pdul01001]
    117627021
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdul03021]
    117627021
   03019 Messenger RNA biogenesis [BR:pdul03019]
    117627021
   03400 DNA repair and recombination proteins [BR:pdul03400]
    117627021
Enzymes [BR:pdul01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     117627021
    2.7.11.23  [RNA-polymerase]-subunit kinase
     117627021
Protein kinases [BR:pdul01001]
 Serine/threonine kinases: CMGC group
  CDK family
   117627021
Transcription machinery [BR:pdul03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     117627021
Messenger RNA biogenesis [BR:pdul03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     117627021
DNA repair and recombination proteins [BR:pdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     117627021
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr ABC1 Haspin_kinase Seadorna_VP7
Other DBs
NCBI-GeneID: 117627021
NCBI-ProteinID: XP_034214782
LinkDB
Position
5:complement(17302055..17306543)
AA seq 418 aa
MAEVDLSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALR
EIKLLKELKDPNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT
LKGLAFCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARVFGSPDRRFTHQVFARWYRAP
ELLFGTKQYGSGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTPSQWPDMV
FLPDYVEYQYVPAPPLRSLFPVASDDALDLLAKMFTYDPKVRISVQQALEHRYFTSAPLP
TYPDKLPRPAPKRESVNSKVSDFNPNDGPTVLSPPRKSRRVMPDREGFEGNAYQGDRIDD
RVGETRQAAGENTSRNEPVPMSVDFSIFGAKPPNRPTITSADRTHLKRKLDLEFQQPE
NT seq 1257 nt   +upstreamnt  +downstreamnt
atggcagaggtcgatctatcgaagaaagtggccgatagatatctgaagcgcgaggtcctc
ggtgaaggtacctacggagtcgtctacaaagccattgatactcagacaggacagacagtt
gctattaaaaaaattcggcttgggaagcaaaaggaaggggtgaattttacagcacttaga
gaaattaaactgctaaaagagctgaaggatccaaatataattgagttgattgatgcattc
ccccataaaggaaacttgcatctagtatttgagttcatggagacagaccttgaagctgtt
atacgtgaccgaaatatattcctatcaccagctgacataaagtcatatcttcagatgact
ttaaaaggacttgctttttgccacaagaaatgggttttacacagggatatgaagcctaac
aacttgttgataggacctaacggacagcttaaacttgcagattttggtttagcacgagta
tttgggagcccagatcgcaggttcactcatcaggtctttgctcgatggtatagagcacct
gagctgttgtttggcaccaagcaatatgggtctggggtggatgtttgggctgcagcttgt
atattcgctgaacttctcctacgcagaccatttttgcagggatcaagtgatattgatcaa
ctaggtaaaatttttgcggcttttgggactccaacgccttctcaatggcctgatatggta
tttcttcctgattatgtggaataccaatatgttccagcaccccctttgcggtcattgttt
ccagtggctagtgatgatgccctggatttgttagcgaagatgtttacttatgatccaaaa
gttaggatatccgtgcagcaggcattagagcacaggtactttacatctgcgcctttgcct
acttatccagataaacttcctagacctgctccaaagcgagaatctgtcaattctaaggtt
tcagattttaatccaaatgatggtcctactgtgttatcacctccacgaaagtcaaggaga
gtgatgccagatcgtgagggttttgaaggaaatgcataccaaggtgataggattgatgat
cgtgttggtgaaaccagacaggctgctggtgaaaatacaagcaggaatgaaccggtgccg
atgtcagtagatttttctatctttggagcaaaacctccaaatagacctacaattactagt
gctgacagaacgcatctaaagaggaaactagatcttgaattccaacagcctgaataa

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