Prunus dulcis (almond): 117627065
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Entry
117627065 CDS
T07328
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117627065
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdul01002
]
117627065
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdul03021
]
117627065
03036 Chromosome and associated proteins [BR:
pdul03036
]
117627065
Peptidases and inhibitors [BR:
pdul01002
]
Metallo peptidases
Family M1
117627065
Transcription machinery [BR:
pdul03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117627065
Coactivators
SAGA/TFTC/STAGA complex
117627065
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
117627065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Peptidase_M1_N
Motif
Other DBs
NCBI-GeneID:
117627065
NCBI-ProteinID:
XP_034214854
LinkDB
All DBs
Position
5:16772813..16788262
Genome browser
AA seq
1469 aa
AA seq
DB search
MAKPRKPKNEDAKPDNSGPVVRHQKLCLSIDIDKRRIYGYTELKISVPEIGIVGLHAENL
GIESVSVDGEQTEFEYYPHSNHKDAESEKRWSWVTSPSSAADAAGSTYISALERELVPNL
LINCCKAFKAGSELQEQLVVDNEVQHSSGEAKQNVRLVRIDYWVEKAETGIHFHDTVLHT
DNQIRRARCWFPCMDESSQSCCYDLEFTVAQNLVAVSTGSLLYQVLSKDDPPRKTYVYRL
DVPVSAQWISLVVAPFEILPDHQLGLISHMCLPANMSKLRNTVEFFHGAFSCYKDYLSIN
FPFGSYKQVFIEPEMAVSSLCSGASMSIFSSQVLFDEKIIDQTIDTRIKLAFALARQWFG
VYITPEAPNDEWLLDGLAGFLTDLFIKKYLGNNEARYRRYKANCAVCKADDSGATALSSA
ASCKDLYGTQCIGIYSKIRSWKSVAILQMLEKQMGPESFRKILQTIVLRAQDKTRPLRSL
STKEFRHFANKVGNLERPFLKEFFPRWVELCGCPVLRMGFSYNKRKNMVELAVLRGCTGL
SDSSASVNANPESEKRDGDNGWPGMMSIRAHELDGTFDHPVLPMAGEVWQLLEIQCHSKL
AARRFQKPKKGSKLDGADDNGDGAPALDMRSSMESPLLWMRADPEMEYLAEIHFNQPVQM
WINQLEKDKDVVAQAQAIATLESLPQLPFSVVNALNNFLIDSKAFWRVRIEAAFALANTA
SEDTDWAGLLHLVKFYKSRRFDANIGLPKPNDFHDISEYFVLEVIPHAIAMVRAADKKSP
REAVEFVLQLLKYNDNNGNPYSDVFWLAALIESVGELEFGQQSILFLSSLLKRIDRILQF
DRLMPSYNGILSVSCIRSLTQIALKLLGFVPLDRVFELVKPFRDSKAIWQVRVEASRALL
DLEFHCKGIDAALELFIKYLDEETSFRGQVKLAVHAMRLCQIRGGSDFNDNIRSQTLVDL
LCLLEGRMAFNNIFLRHHLFCILQILAGRAPTLFGVPRDHKPFDLGAAESFHEQKNVFAT
FIPESKFLEPPSEAPNHSHDDLTVLETSRDGLPAPEISMNGLSVPAPETSKDGFAFPGAS
KDDLGVPKPTNDGLDAPEPSSGGLGDPQPSNVCLVAPEPSGGGLVAPEPSGGGLVAPEPS
IGSFGATEPSIGSFGAPEPSKDGLVVSEPFKDGLAVLEPFKEADTISNSHKRKLPVVKIR
VKRSATTSRAEECDNQTAERSQGGHLETDHGPSSSVSVDAPHRNFPETLSHSNQNVEEVN
SWHDLGSRMTASIGSAKLASDGDDIGKELQCTADSSKVSALPQPEDPSPRYIQDNQGADV
QKYASLQALSVPRNDVNGGSFGMVDSLPRGKEKEKKKDKEKKRKRDKGHRDDPEYLERKR
LKKEKKQKEKELAKLLNETGKVSSADLPHSRKEILGIKPANVQLKPAEPSGSNKLVITGV
EATRPEASEGTSATPRFRIKTKIRTQSKP
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcctcgcaagcccaagaatgaggacgccaagcccgacaactccgggccagtc
gttcgtcatcagaagctctgcctctccatcgacatcgataagcgtcgcatttatgggtac
acagagttgaagatttccgtcccagaaattgggattgtagggttacacgcagaaaacctg
gggattgagagtgtttcagtcgacggcgagcagactgagtttgagtactacccgcatagt
aatcataaagatgcggaaagcgagaagagatggagttgggttacgtcgccgagctctgct
gccgatgcggcaggttccacttatatatcggctcttgagagagaattggtcccaaattta
ctgatcaattgttgtaaggcattcaaggccggaagcgaactgcaggagcaactggttgtg
gataatgaggtgcaacattcctctggggaagccaagcagaatgtgcggttggttcgtatt
gattattgggtagagaaagcagagacgggaattcactttcatgatactgttctgcatact
gataaccagatacggcgtgcacgatgctggttcccttgtatggatgaaagttcacagagt
tgctgctatgatctggagtttactgttgcacaaaatcttgtggctgttagcactggaagc
ttactataccaggttttgagcaaggatgatcctcctcgcaaaacatatgtttatagatta
gatgttccagttagtgctcagtggatatctttggtggttgcaccttttgaaatccttcct
gatcaccaacttggtctaatatctcacatgtgcttgccagctaatatgtcaaagcttcgg
aatactgtagagttttttcatggtgcatttagctgttataaggattacctttcgataaac
tttccttttgggtcatacaagcaagtttttattgagcctgagatggcagtatcatcatta
tgttcgggggcctccatgagcattttcagttctcaagttttgtttgatgagaagatcatt
gatcagaccattgacacaaggattaaacttgcgtttgccctggcaagacaatggtttggt
gtctatatcacccccgaggcaccgaatgatgagtggctgctggatggtcttgctgggttt
ttgacagatttgtttatcaaaaaatatttgggaaataatgaggcccgctatcgaagatat
aaggcaaattgtgctgtttgcaaagcagatgatagtggtgcaactgctttaagctctgct
gcttcttgtaaggatttgtatggaactcaatgtattggaatatacagcaaaattaggtca
tggaaatctgtggcaatccttcaaatgttggaaaagcagatgggacccgagtctttccgt
aaaattttgcagacaatagttttgagggctcaagataagacccgtcctttgagatccctt
agtacgaaggagtttaggcattttgctaataaggttggtaatcttgagcgtccatttctt
aaagaattttttcctcgatgggtagaattgtgtggttgcccagtcttgaggatgggcttc
tcctataacaagaggaagaatatggttgaattggcagttttacgtgggtgcacaggcttg
tcggattcaagtgcctctgttaatgcaaatccagaatctgaaaagcgagacggtgacaat
ggatggcctggaatgatgagtatcagggctcatgaacttgatggtacatttgatcatcca
gttctgccaatggctggagaagtatggcagctgctggaaatacaatgtcattcaaagctt
gctgctagacgctttcaaaagcctaaaaaaggttcaaaactagatggggctgatgataat
ggggatggtgctccagctctagatatgcgttccagtatggaatcaccgttgttgtggatg
agggcagacccagaaatggaatatcttgctgaaattcatttcaatcaacctgtacagatg
tggattaatcagttggagaaggacaaagatgttgttgctcaggcacaagcaattgcaaca
ctggagtccttaccgcagcttcccttttctgttgttaatgctctcaataatttcctcatt
gactccaaggccttctggagagttcgaattgaggccgcatttgcgttggcaaatacagca
tctgaggatactgattgggctggtctactccatttagtgaaattttataaaagtcgaagg
tttgatgcgaacattggactccccaagccaaatgactttcatgatatttctgagtacttt
gttcttgaggtcattccacatgctatagctatggtcagagctgctgacaagaaaagccca
agagaggctgtggagtttgttttacaacttttgaagtacaatgacaacaatgggaaccct
tactctgatgtcttctggcttgctgcactaattgagtctgttggagaacttgaatttggg
caacagagtattctctttttatcatctctgctgaagcgcattgatcggattttgcaattt
gacaggttgatgcctagctacaatggtatcttgtcagtcagctgtattaggtccctgaca
cagattgccttaaaactgttgggctttgttcctctggatcgcgtatttgaacttgtaaaa
ccttttcgggatagcaaggcaatatggcaagttcgggttgaagcaagcagagcactcctt
gatcttgagttccactgcaaaggcattgacgcggctttggaactgtttatcaaatattta
gatgaagagacatccttcagagggcaggtgaaattggctgtgcatgctatgagattatgc
cagattagaggtggatctgattttaatgacaacattaggagccaaactcttgtggatttg
ctttgcctacttgaaggccggatggcttttaataatatctttcttcgtcatcacttattc
tgcatcctacaaatccttgcaggaagggccccaacactgtttggagtacccagagatcat
aaaccatttgatctaggggctgcggaaagcttccacgagcagaaaaacgtctttgctact
ttcattccagaaagtaaatttttggaaccaccttctgaagccccaaaccattcccatgat
gatttgactgtccttgaaacttccagagatggactgcctgctccagaaatttccatgaat
gggttatcagttccagctccagaaacttccaaggatgggtttgcctttccaggagcttct
aaagatgatttgggtgttcccaaacctacaaatgatggtttagatgctccagaaccgtcc
agtggtggtttgggtgatccacagccttccaatgtttgtttggttgctccagaaccttcc
ggtggtggtttggttgctcccgaaccttccggtggtggtttggttgctcccgaaccttcc
attggtagttttggtgcaacagaaccttcaattggtagttttggtgctccagaaccttcc
aaggatggcttagtggtttcagaacctttcaaggatggcttggcagttctcgaacctttc
aaggaagcagataccatttccaacagccataaacggaagctgccagttgttaagatcagg
gtcaaaagatctgctactactagtagagcagaagaatgtgataatcaaactgctgagagg
tcacaaggtgggcatcttgaaactgatcatgggccaagcagttcagtatctgtggatgcg
cctcacagaaattttccagagactctgagccatagcaatcaaaatgttgaggaagttaac
tcttggcatgatcttggatcccggatgactgccagcattggtagtgcaaaacttgcgagt
gacggtgatgatataggaaaggaattgcagtgcactgctgattcaagcaaagtttctgca
ctgcctcagcctgaagatccatcacctaggtatatccaggataaccaaggtgcagatgtc
caaaagtatgcaagtctccaagctctttcagttcctaggaatgatgttaacggtggttca
tttggcatggtggattctcttcctcgtgggaaagaaaaggagaaaaagaaagacaaggaa
aagaaacgaaagcgggacaaggggcaccgagatgatcccgagtatctggagcggaagcgc
ttaaagaaggagaaaaaacagaaggagaaggaattggcaaagttgttgaatgagaccgga
aaagtatcttccgcggacttaccacacagtaggaaagagatacttggtataaagccggca
aatgtgcaactcaaaccagctgagcccagtggatctaacaaattagtgatcacaggggtc
gaagccaccaggcctgaggcatcagaaggtacttctgctactcccaggtttcgtattaaa
acaaaaatccgaacacagagcaaaccgtaa
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integrated database retrieval system
