Prunus dulcis (almond): 117627152
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Entry
117627152 CDS
T07328
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117627152
03036 Chromosome and associated proteins [BR:
pdul03036
]
117627152
Enzymes [BR:
pdul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
117627152
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117627152
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
117627152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MOV-10_beta-barrel
AAA_11
Motif
Other DBs
NCBI-GeneID:
117627152
NCBI-ProteinID:
XP_034215010
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All DBs
Position
1:5049446..5052680
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AA seq
692 aa
AA seq
DB search
MYYVPSLIAKTSSVVGSSTTLTHQGRQLQLPLFNSFTNFSDRNRSPPLTSTNQSPAFYNY
KAPSPPSQPVKSPFSSSSSSPKPPTSSLKPLQSSYISTSSPSPEFPTSSSSTFPKPPTSS
SKLPQSTFVNPSSSNASPFVLEFPTSVSKLQQSSSVDQRSALPKPPTSSSKLPQSTLISP
SSPSLQLQTPSSRPHPPKLSTSSSKPPQASSKSHSSSPNPPTSSKPSPPSGRPASSTTLP
PIFKQVLSPASSDVITEKGKKNYVSVVEKGSLPIFTIPEDFKDLIKNDIVPKVLKQPLSS
TTYKDYFAALLYAEEFYHEKWADFNMKNVTLKLQKASVYKNLDKEEKTFVEFMIDSVPEN
RPFLLSRDLVYVRPSGTNAERFQGIINRIIRSNLVLVEFEDEFYDYHYSTQKYDVSFSFN
RVCLKRAHQAVQTASDTLFQNFLFPDGVSRTSIPIAPALLSGHHKLDAKQLSAVRQILSI
KGSPPYLVAGQLCVERNVFRPSRTGAVVCEAVHQLCQTSLKNRILICAPSNRCCDGIMRS
LLKVIPESDMFRANAAFREKDEVPDDILPSCLYEDPYFSCPPTEKLKKFRVIFSTLMSSF
RLHDKGLTSGHFSHIFLVDASSATEPETAVALTNFAEKSTTVIVTGQPGDNKRWVRADMA
RQKGLKISYFERLFKSRPYRSLNPMLITQLDQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtactatgttccttccttaatagcaaagacctcttcagtcgttggttcgtcaacaaca
ctgactcatcaaggcaggcagcttcagcttccacttttcaattcatttacaaacttttcc
gatagaaaccgctcgccacccttgacttctactaatcaatctccagccttctataactat
aaagccccatcacctccatctcaaccagtcaaatctccctttagttcatcttcatcatcc
cctaagcctccgacatcttcattgaaaccgctgcaatcttcttatatcagtacatcttct
ccatctcctgaattcccaacatcttcttcttcaacattccctaagcccccaacatcttca
tctaaactgcctcaatcaacttttgttaatccatcttcttccaatgcatctccatttgtt
cttgaattcccaacatctgtatctaaattacaacaatcttcttctgttgatcagcgttca
gcattgcctaaacccccaacatcttcatctaagctgccccaatccactcttattagtcca
tcttcaccatcccttcaactccaaacaccttcatctagaccacatcctccgaaactgtct
acatcctcctctaaaccacctcaggcttcatcaaaatcacattcatcatcaccaaatcct
ccaacatcttcaaaaccatctccaccctcgggacggccagcgtcttccactacgctccct
ccaatctttaagcaagttctatccccagcctcctcagatgtaataactgaaaaggggaag
aaaaattatgtatcggtggttgaaaagggttcattacctatattcacgattcctgaggat
ttcaaagatttgatcaagaatgacattgtgcctaaagttcttaaacagcctctgtcttcc
acgacatataaggattactttgctgctctgttatacgctgaagagttctaccatgagaaa
tgggctgatttcaatatgaagaatgtgacactgaagttgcaaaaagcatcagtttacaaa
aatctagacaaggaagagaaaaccttcgtagaatttatgattgattctgttcctgaaaat
cggccattccttttgtcgagggacttagtctatgtgaggccatcaggtacaaatgctgag
cggtttcagggcattataaatcgcattattaggagcaatcttgtattagtggaatttgaa
gatgaattttatgattatcattattcgacccaaaaatatgatgtcagcttctcattcaat
cgagtatgtttgaaaagagctcaccaagcagttcaaacagcatcggatactttgtttcag
aacttcctctttcctgatggtgtttcccgtacgagcattcccatcgcaccagcgctgctg
tctggccatcacaaacttgacgccaaacaattatctgctgttcgtcaaattttaagcatt
aagggctcaccaccttacttggtggctggccagctttgtgttgaaaggaacgtttttagg
ccgtcgagaactggagcagttgtttgtgaagcagtgcaccagttatgtcaaacctcactc
aaaaataggattctgatatgtgctcctagtaaccgctgttgtgatgggattatgagaagc
ttgttgaaagtgattccagagtcagatatgtttcgagccaacgctgcattccgtgagaaa
gatgaggtgcctgatgacatcctcccatcatgcctttatgaagacccttatttctcttgt
cctccaactgagaagcttaaaaaattcagggtgattttctcgactctcatgagtagcttt
cggctacatgataaaggcctaacttctggacattttagtcatatttttctggtggatgct
tcatctgccactgagccggaaacagcagtggccttaactaattttgcagaaaaaagtact
actgttatagtcactggtcaaccaggagataataaacgttgggttcgcgcagacatggca
aggcaaaagggactgaagatttcgtacttcgagagacttttcaagtcaaggccatataga
agcctcaatccaatgctgatcacacaattggaccagtag
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