Prunus dulcis (almond): 117627291
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Entry
117627291 CDS
T07328
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03015
mRNA surveillance pathway
pdul04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117627291
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117627291
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pdul01009
]
117627291
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117627291
03036 Chromosome and associated proteins [BR:
pdul03036
]
117627291
Protein phosphatases and associated proteins [BR:
pdul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
117627291
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
117627291
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
117627291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EZ
Vac14_Fab1_bd
HEAT_EF3_N
Htt_N-HEAT_1
PDS5
RTP1_C1
CLASP_N
Cnd1
Adaptin_N
DUF2773
Motif
Other DBs
NCBI-GeneID:
117627291
NCBI-ProteinID:
XP_034215193
LinkDB
All DBs
Position
5:complement(16935471..16942509)
Genome browser
AA seq
587 aa
AA seq
DB search
MAMVDEPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSDNNDDD
DEVLLAMAEELGVFIPYVGGVEYANILLPPLETLCTVEETCVRDKAVDSLCRIGAQMREK
DLVEYFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPETLKTELRTTYSQLCQDDMPMVR
RSAATNLGKFAATVEAAHLKTDILSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVT
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEATRSDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPELAIQQILPFVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGSLCMQWLNDKVYSIRDAAANNVKRLAEEFGPDWAMQHIVPQV
LDMINNPHYLYRMTILHAISLLAPVLGSEITCSKLLPVVINASKDRVPNIKFNVAKVLQS
VIPIVDQSVVEKMIRPCLVELSEDPDVDVRSFASQALQSIEQVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatggtggatgaacctttatacccaattgcggttttaatcgacgagctcaagaat
gaagacattcagctccggttgaactcaatccgcaggctctccaccattgctcgtgcactt
ggagaagagaggaccaggaaggaactgattcctttcctcagtgataacaatgatgatgat
gatgaagtgcttctggcaatggcagaagagttgggggtgtttatcccatatgtaggtggt
gtagagtatgccaacattctgctcccacctttggaaacgctctgcactgttgaggaaaca
tgtgtgagggacaaagcggtggattcattgtgtagaattggggcgcagatgagggagaag
gacttggtggagtatttcattcctttggttaagagacttgctgctggagaatggtttaca
gcccgagtttcatcctgtggtttgtttcatattgcttatcctagtgccccagagacttta
aagactgaactaagaacaacatacagtcaactgtgtcaagatgacatgcccatggttaga
agatctgctgctactaacctaggaaaatttgctgcaactgtagaagccgcgcacctcaaa
actgacatcttgtcaatatttgaggatttgacgcaggatgatcaggattctgttcggtta
ttggcagtagagggttgtgcagctcttgggaagttgttggaaccacaagattgtgtgacc
catattcttcctgtcattgttaatttttcacaggataagtcttggcgtgttcgttatatg
gttgcaaatcaattatatgagctgtgtgaagctgttggtccagaagctacaaggtctgac
ctggtgcctgcatatgttcggctgcttcgtgataatgaggctgaagtgagaatagctgct
gcaggaaaagtaactaagttttgcagaattttgaatccagagcttgctattcagcagatc
cttccatttgtgaaggaattgtcaacagattcatcccaacatgttcgttctgcattggct
tcagtaataatggggatggcaccagttttaggaaaggatgcaaccatagagcaactactg
cctattttcctttctcttctaaaagatgaattccctgatgtccggctgaatattattagc
aagcttgatcaagtcaaccaggtaattgggattgatctgctgtcccaatctctattgcca
gcaattgttgaacttgcagaggatagacattggagggttcggctcgcaataatagaatac
atccctttattggcaagtcagttgggtgtagggttttttgatgataagcttgggtccctt
tgcatgcagtggttaaatgataaggtttactcaatacgtgatgcagctgctaataatgtg
aagcgccttgcagaagaatttggcccagattgggcaatgcagcatatagtcccacaggtt
ttggatatgattaacaaccctcactatttgtatcgaatgaccattctacatgcaatttcc
ctactcgctcctgttttgggatcagaaatcacttgttcgaaacttctaccggttgtcatc
aatgcatcaaaagatagggtaccaaacatcaagttcaatgtggctaaagtgttgcagtca
gttattccgatagttgatcagtctgtggtggagaagatgattcgcccttgtttggttgag
cttagcgaggatcccgatgttgatgtaaggtcttttgctagccaagctctccagtcaatt
gaacaggtcatgatgtctagctag
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