KEGG   Prunus dulcis (almond): 117627325
Entry
117627325         CDS       T07328                                 
Name
(RefSeq) lysine-specific demethylase 5B-like isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
pdul  Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pdul01009]
    117627325
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pdul03036]
    117627325
Enzymes [BR:pdul01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     117627325
Protein phosphatases and associated proteins [BR:pdul01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117627325
Chromosome and associated proteins [BR:pdul03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    117627325
SSDB
Motif
Pfam: PLU-1 JmjC PHD JmjN zf-C5HC2 ARID KDM5_C-hel PHDvar_NSD PHD_5 BT_3657-like_N DUF5661 YDR124W_N KBP_C
Other DBs
NCBI-GeneID: 117627325
NCBI-ProteinID: XP_034215245
LinkDB
Position
5:complement(9730955..9745547)
AA seq 1851 aa
MGKGRPRAVEKGVVGPNLSVSASGSLNIPSAPVYYPTEDEFRDPLEYIYKIRPEAELYGI
CRIVPPKNWKPPFALDLDSFTFPTKTQAIHQLQVRPASCDSKTFELEYNRFLEDHCGKKL
RKKVVFEGEELDLCKLFNAVKRYGGYDKVVKGKKWGEVARFVRPARKISECSKHVLCQLY
RDHLHDYEKYYNKLNKEVVRSRKRGMHEEKRSEQNVECSSSKRRRTNNEGEKVKVCKVEK
EDEEHDQICEQCRSGLHGEVMLLCDRCNKGWHIHCLSPPLKQVPPGNWYCLDCLNSDKDS
FGFVPGKRFSLEVFRRVANRSKRKWFGSGSASRVQIEKKFWEIVEGSIGEVEVMYGSDLD
TSIYGSGFPRGNDQRPESVEAKIWDEYCGSPWNLNNLPKLKGSVLRTVHHNIAGVMVPWL
YVGMLFSSFCWHFEDHCFYSMNYLHWGEPKCWYSVPGSEASAFEKVMRNSLPDLFDAQPD
LLFQLVTMLNPSVLQENGVPVYSVLQEPGNFVITFPRSYHGGFNLGLNCAEAVNFAPADW
LPHGGFGAGLYQLYRKTAVLSHEELVCVVAKSDCDSRVTPYLKKELTRVYSKEKTWRERL
WRKGIIKSSLMSSRKCPEYVGTEEDPTCIICKQYLYLSAVVCRCRPSASVCLEHWEHLCE
CKSRRLRLLYRHTLGELHDLVLAMDKHCFEETTESRTLRRQISCPDEPTALKKKVKGGHS
TFSQLAEKWLLRSCKISQGPFSRDEYVSVLKEAEQFLWAGSEMNPVREMAKNLIRSQKWA
EGVRDCLSKIETWSSHCGNGIERAHLEYINELLSFDAVSCYEPGHLNLKNYAEQARGLIQ
DIESAMSSCPKISELELLYSRACEFPIYVKESENLLQRISSAKVLMEGIRNCISEKRPAA
IDVDVVYKLKLESSELQVQLPDVEKLSDLLEKAESCRVQCGEILKDHISLKDVEVLLQEL
DGFTVNIPELKLLSQYHTDAVSWISRFDAVLVSSHGREDQNNAVDELMLILKDGASLRIK
VDQLSLVECELKKARCREKALRMRDTKLSLDFIQEVIMEAAVLHIEGEKLFVDMSKVLDA
ALQWEERAKYILAHEAHISDFEDVIRSSEDIYVNLPSLLDVKDTLSKAMAWLRSSEPFLV
TCSPLVPASSSLLNVDTLKELVSESKCINVSLKEKTMLETVLMNCEEWKHDAFSLLQDIS
CLFDMRISGDGIRDSLISKIESLVKRIESMENTGLSLAFDFDELAKLKDVCSMLQWCKKA
LSFCLGAPSFEDVDGLMNGVENSCGTYASSALWCSLVDGVKWLKHATKVISASCNFGRCK
LSEAEEVLSNSQSLSVSFPLMFGQVESAIQKHKCWLEQVHQLFSLRPGERSWSLMLQLKE
LGVSVAFSCTELDLIISEVGRVESWKRQCMDIVKSLIEDEDSLLGALEKMSQTLDISLHI
YDKPHGLKESGYYACCSSGSLDQEFLTCSSCKDCYHGRCLGTSIVDAKHAKFVCPCCRYL
ECGTTSQNGGSLKFGGMRPELQKIIEHISGEEDFCACIEENEVLKEVMKKALACKSRLKE
IVDFALAYSDKDLSVIFGKLSTALKAREMEGVHDHEGDCNLMLVLSRYSWKVKVNKSLEG
SQKPTIQQIQQHLKEGAALNIPPGDYYRQKLTEVKCIGLQWADNAKKVAADSGALPLGKV
FELVLEGENLPVRMEKELKLLKTRSMLYCICRKPYDQRAMIACDQCDEWYHFDCLKLHSA
PEVYICPACEPRAQETEVFSTASGVDHERCTDAKFVEPKTPSPTHTKCRTNLKKVESDLK
QKMCAITDPSNLFRCSGGIERLWWRNRKPFRRAAKRRAELESLSLFSHLQQ
NT seq 5556 nt   +upstreamnt  +downstreamnt
atggggaaaggaagacctagggctgtggagaagggagtggtaggtccaaatttgagtgtt
tcagcatctggatcattgaatataccttctgcacctgtatattatcctactgaggatgaa
tttagagaccctttggagtatatatataagatcaggccagaggctgagttatatgggatt
tgtaggatagttccacccaagaactggaaacccccatttgctttggatttggattcattc
acattccccacgaaaacgcaagccattcatcagttgcaggtacggcctgcttcgtgtgat
tccaagacttttgagttggagtacaataggttcttggaggaccattgtgggaagaagttg
aggaagaaggtggtttttgaaggggaggagttggatttgtgtaagttgtttaatgctgtg
aagcggtatggagggtatgataaggttgtgaaggggaagaagtggggcgaggttgctcgt
tttgtgaggccagcgagaaagatttcggagtgttcgaagcatgtactgtgtcaattgtat
cgagaccatttacatgattatgaaaagtattataataagctgaacaaagaggtggttagg
agtcgtaaaaggggtatgcatgaggagaagaggagtgaacaaaatgttgaatgttccagc
tccaaaaggaggcgaaccaataatgagggtgagaaagttaaggtctgtaaggtagagaag
gaggatgaggagcatgatcagatatgcgaacaatgcagaagtgggttgcacggcgaagtg
atgcttttgtgtgacaggtgcaataaggggtggcacattcattgcctctctccaccattg
aaacaggtcccacctgggaattggtattgtttggattgcttgaattctgacaaagatagt
tttggttttgtgcctggtaagcgtttctcgctggaagtttttaggcgtgtggcaaatcga
tcgaagaggaaatggtttgggtcaggatctgcatcacgggttcaaatagagaaaaagttt
tgggaaattgtggagggttccattggtgaggttgaagttatgtatggcagcgacttggac
acttctatttatgggagcggttttccacgtggaaatgatcagagaccagagtcagttgag
gccaagatatgggatgaatactgtggtagcccatggaatctgaataacttgcccaagttg
aaagggtcagtgcttagaactgttcatcataacattgctggtgttatggtgccttggctg
tatgttgggatgctgttctcatctttttgttggcattttgaagatcattgtttttactcg
atgaattatttgcactggggagagccaaaatgttggtacagtgtccctggtagtgaagct
agtgcatttgagaaggtgatgcgtaacagtcttcctgatctttttgatgcgcaacctgat
ttgctctttcagctcgtcaccatgttaaatccatctgttttgcaagagaatggagttcct
gtatatagtgtattacaggagcctggcaattttgtcatcaccttccccagatcttaccat
ggaggttttaatctcggtttgaattgtgcagaagctgtcaattttgctcctgcggactgg
ctacctcatggtgggtttggagcagggctgtatcagctttatcgcaaaactgctgttctg
tctcacgaggagcttgtttgcgtggtagccaagagtgactgtgacagcagagtaacacct
tatttgaagaaagaattgacaagagtttacagcaaggaaaaaacctggagggagcgcctt
tggagaaaagggatcatcaaatcatctcttatgtcctctaggaaatgccctgaatatgtt
ggtaccgaagaggatcctacatgcattatatgcaaacaatatctttatctttctgctgtc
gtttgtcgttgtaggccatccgcatctgtatgtctggagcattgggaacacctttgtgaa
tgcaaatccagaagacttcgtcttctataccgtcatacactgggagagttgcatgacttg
gtgcttgcaatggataaacattgtttcgaggagacaacagaaagtaggactttaagaagg
caaatctcatgccctgatgaaccgactgctttgaaaaaaaaggtcaaagggggccattct
actttttctcaacttgcagaaaaatggcttttgcgctcgtgtaagatttctcagggtccg
ttttcgagagatgagtatgtttctgtattaaaggaggctgaacaatttctttgggctggt
tctgagatgaatcctgtgcgggaaatggcaaaaaatttgattcgatctcagaaatgggct
gaaggtgtaagagattgtctatctaaaattgaaacttggtcgtctcattgtggcaacggt
atagagagagctcatttggaatatattaatgagttgctgagttttgatgcggtgtcctgt
tacgagcctggtcatcttaatttgaagaattatgctgaacaggcaagggggttgatacag
gacattgagtctgctatgtcatcatgcccaaagatatctgagttggaattgctgtactcc
agagcctgtgagtttccaatatatgtgaaggaaagtgaaaacttactacaaagaatttca
tcagcaaaggtcttgatggaaggcataagaaattgcatctcagaaaaacgtcctgctgca
attgacgttgatgttgtttacaagttgaaattggagagttcggagctccaagttcaactc
ccagatgtagaaaagctttcagatctattagagaaggctgaatcatgtcgtgtgcaatgt
ggtgaaattttgaaggatcatattagccttaaggacgttgaggtgcttcttcaagagctg
gatggttttactgttaacataccagagctgaagcttctgagtcagtaccacactgatgca
gtttcttggatttctcgttttgatgctgttcttgtgagcagtcatggaagggaggatcaa
aataatgcagttgatgagctaatgcttattctaaaagatggagcatctttgagaattaaa
gttgatcagttgtctttagtagagtgtgagttgaagaaggctcggtgcagggaaaaggcg
ctgaggatgcgagatactaaattgtctctggacttcattcaagaagtgataatggaggca
gcagtgttacatatagagggagagaagttattcgttgatatgtcgaaagtactggatgct
gccttgcaatgggaggaaagagcaaaatatattcttgcacatgaggcccatatatctgac
tttgaggatgttattaggagttcggaagacatatatgtgaatttaccttctcttcttgat
gtcaaggatacactatcaaaagctatggcctggttgaggagctcagagccatttttggtg
acttgttctcctttggtacctgcgtcaagttctttgctgaatgttgacaccttgaaggaa
ttagtttcagagtcaaagtgtataaatgtatccttgaaagaaaaaacgatgcttgagact
gttctaatgaactgtgaggaatggaagcatgatgctttctctctactgcaagatataagc
tgcctatttgatatgaggatcagtggtgatggaataagagatagtcttatttccaagatt
gaaagtctagttaaaagaatagaatccatggagaacactggtttatcacttgcttttgac
tttgacgagcttgcaaaacttaaggatgtgtgttctatgctgcaatggtgtaagaaggca
ctttctttctgcttgggtgctccttcttttgaggatgtggatggtttgatgaatggtgta
gaaaattcatgcggtacatatgcctccagtgcactgtggtgctcattggttgatggggtc
aaatggcttaagcatgctacaaaggttatttctgcatcatgcaattttggaagatgcaag
ttaagtgaagctgaagaagttctttctaattctcagagtcttagtgtttccttccctttg
atgtttggtcaagttgaaagtgccattcagaaacacaagtgttggcttgagcaagtgcat
caacttttcagtttaaggccgggggaacgatcttggtcactaatgttacagctaaaggaa
cttggagtttctgttgctttcagttgcacagaactagatttgatcatatctgaagttgga
agggttgagagttggaaacgacagtgcatggatattgtcaagagtctaattgaagatgag
gattcattgcttggtgctctagaaaagatgagtcagactctagatatatctttgcacata
tatgataagccccatggcttgaaagagagtggttattatgcgtgctgctccagtggttct
ctggatcaggaatttcttacttgttcttcgtgcaaggactgctaccatgggcggtgtcta
ggaacttccatagtagatgcaaaacatgcaaagtttgtatgcccttgttgccgatatctg
gaatgtggaacaacttctcaaaatggaggcagtctgaaatttggagggatgcgtccagaa
ctgcaaaaaattattgaacatatatccggtgaagaagatttctgtgcttgtattgaagaa
aacgaggtactgaaagaagtcatgaagaaagctctggcatgcaaatcccgcttgaaagaa
atagtggattttgcattagcttattctgataaagatctgagtgtcatctttggaaaacta
agcacagctttaaaggccagagaaatggaaggtgtacatgatcatgaaggcgattgcaac
cttatgttggtgttatcaagatactcatggaaagtcaaagtcaataagtcactggagggt
tcacaaaagcccacaatccaacagattcagcagcatttaaaagagggagctgccttgaat
attccacctggagattactataggcagaaacttacagaagtgaagtgtattggcttgcag
tgggcagataatgctaagaaggtagctgcagattctggggctctaccactgggtaaagtt
tttgaacttgttttggagggtgaaaacttgcctgttcgtatggagaaggaacttaagtta
ttgaaaactcggagtatgctttattgcatatgtcgaaagccgtatgatcagcgggcgatg
attgcatgtgaccaatgtgatgagtggtatcactttgattgccttaaattacattccgca
ccagaggtttacatttgccctgcatgcgagcctcgagcacaagagactgaagtgttctct
acagcatcgggggtggatcatgagagatgtactgatgccaaatttgtagagcctaaaacg
ccctcgcccacacacacaaagtgcaggacgaacctaaagaaagtagagtctgatctaaaa
caaaagatgtgtgcaattacagatcccagcaatctttttaggtgttctggtgggatagag
cgtttatggtggcgaaatcggaaaccttttagaagggcggccaaaagacgtgccgagctt
gaaagtctctctctattttctcatttgcaacaataa

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