Prunus dulcis (almond): 117627372
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Entry
117627372 CDS
T07328
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117627372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdul03041
]
117627372
03009 Ribosome biogenesis [BR:
pdul03009
]
117627372
Enzymes [BR:
pdul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117627372
Spliceosome [BR:
pdul03041
]
Complex A
U1 snRNP components
U1 related factors
117627372
Complex B
117627372
Ribosome biogenesis [BR:
pdul03009
]
Eukaryotic type
Pre-60S particles
Helicases
117627372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
117627372
NCBI-ProteinID:
XP_034215333
LinkDB
All DBs
Position
5:13847353..13851535
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AA seq
638 aa
AA seq
DB search
MYAYDNRYTDVNSYRERRSDLMGPAPAVAPPAGPAYGRGGGSAPYAGPTPPVAPYSGRVA
GPVTGPGDFNGYPTFQPPSGRFNIGRGGGNGSFGGRASNGHIVGGRGRGGGGRFGGGRDF
DGGRGGGGRSSGFSRGGSAGFSGGRGFGGRGGGRHSGSSRGDLDNIVLPKQDFGSLVPFE
KNFYVESSSVRAMSEQEVMVYRNRREITVEGHDIPKPIQMFEDANFPDYCLDAIAKLGFV
EPTPIQAQGWPMALKGRDLVGIAETGSGKTLSYLLPALVHISAQPRLVPGEGPIVLVLAP
TRELAVQIQEESSKFGSRSNIRSTCIYGGAPKGPQIRDLKRGVEIVIATPGRLIDMLEAQ
HTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQTRPDRQTLYWSATWPREVETLARQFLR
NPYKVIIGSSSLKANQSIKQVVEVVSDGEKYNRLIKLLKEAIVGSRILIFVETKKGCDQV
TKQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRNPIMTATDVAARGLDVKDIKCVINYD
FPSSLEDYVHRIGRTGRAGATGTALTFFTHANAKFARELIKILQEAGQVVSPALAAMSRS
SGSFGGSGGNFRNRGRGGGFGNRISGSNTVPIGYKRPW
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcctacgacaacagatacaccgacgtcaactcctaccgtgagcgccgaagtgac
ctaatgggtccagcgcctgcggtggctccgccagcgggccccgcctatggccgtggcggt
gggtcagccccgtatgcaggcccaacgcctccggtcgccccgtattctggacgagtagcc
ggaccggtaaccggtccaggggactttaatgggtacccgacgttccagcccccttcgggt
cggttcaatattgggcgaggtggtggtaatgggagttttggtggcagagcctccaatggt
catattgttggtggaaggggccgtggcggtggtggtaggtttggtggtggtagggatttt
gatggaggccgtggcggtggcggtaggagctctggttttagccgcggtggaagtgcgggt
tttagcggtgggcgtggatttggaggaagaggaggaggtagacatagcggttcatcaaga
ggagacttggataacattgtgcttcccaagcaagattttgggagcttggtaccttttgag
aagaatttctatgttgagagctcttcggtgagggcaatgtcagagcaggaggttatggtg
tatcgcaacaggcgggagattaccgtcgaagggcatgatatcccaaagccgattcagatg
tttgaggatgcgaatttccctgattactgccttgatgctattgcaaaattgggttttgtt
gaaccaacaccaattcaggctcaaggatggccaatggcattaaagggtagagatttagtt
ggaattgccgagactggttctggtaagactttgtcctatctgctgccagctttggtgcat
attagcgcacagcctcggttagtgccaggtgaaggtcctattgtgctagtattagcacct
actcgagaattggcagttcaaattcaggaagaatcttcaaaatttggctcacgttctaat
attaggagtacttgcatttatggtggtgctccaaaaggaccccagatacgggatcttaaa
agaggggttgagattgtcatagctacacctggccgactgatagatatgttggaagcacag
cacacaaatttgcgaagagtgacctacctagttttggatgaggctgacaggatgttggac
atggggtttgagcctcagataaggaaaattgtatcacaaacccgaccagatcggcagaca
ttgtattggagtgccacatggccaagggaggttgaaactttagcaaggcagtttttacgt
aacccatataaggtaatcattggatcatcaagtcttaaagcaaatcaatctataaaacaa
gttgttgaagttgtgtcagatggggagaaatataataggctgatcaaactgctcaaagaa
gcaatcgttgggagccgaattctgatatttgtcgagacgaaaaagggatgtgaccaagtt
actaagcaattgaggatggatggatggccagctctatccattcacggtgataaaaaccag
gccgaaagggactgggtcttggctgagtttaaaagtggaaggaatcctataatgactgcc
actgatgtggctgcgcggggtcttgatgtgaaggacataaaatgcgtgatcaattatgat
tttccatcaagcctagaggattatgtccacagaattggacgaactggtcgtgcaggggca
acaggaactgctttaacctttttcacacacgcaaatgcgaaatttgctagggaactaatc
aagatcctgcaagaagcaggtcaggtggtgagccccgcattggctgcaatgtcccggtca
agtggtagtttcggaggctctggagggaacttccgcaatagaggccgaggaggaggattt
gggaatcggatttcgggttcgaatactgttcctattggttacaagagaccatggtag
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