Prunus dulcis (almond): 117627373
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Entry
117627373 CDS
T07328
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdul03041
]
117627373
Spliceosome [BR:
pdul03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
117627373
Other components
Complex C specific factors
117627373
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Paralog
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Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
117627373
NCBI-ProteinID:
XP_034215334
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All DBs
Position
5:complement(4955484..4959632)
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AA seq
888 aa
AA seq
DB search
MDDYQEMERFGMEKDYEDSQWIGGEFYYRKRKDKRVQTKDDVLYGIFSADSDDDEDNEGS
RKRRKDQKVDLTKPINFVSTGIVLPNQEMDTNLKQQNDDLGASGVGTSGLGFGAATGSGL
GFNNLNSGLGLNNSNLDPPGGEEEDEENDNNFLPTAFGKKIKEGAERRQKEREKLKLLKQ
TTIQSRSRRDSEESQFGLGGASGGGGDGGLGAFEKHTKGIGMRMLKNMGYKGGGLGKNQQ
GILAPIEAKLRPKNMGMGFNDYEETKIKRPGLQELEAEKPSKPLPAVSSSTTTKKSLSWK
KAVANRANKDHYVSAKELLAKKQEESTEVFVHKVVDMRGPQVRVLTNLENLNAEEKAREE
DIPMPELQHNLRLILDLAELDIQKIDRDLRNERDTAISLNQEKERLATEVARQKQHLDSL
GDIMNVLDRLGEENIMGALTLDSLAKDFGDLQKRYADDYKICNLSCIACSFAIPLFIRMF
QGWDPLRNPSHGLNVVSSWKGLLHGEGEREQYLDIWDNTMPPYTQLVSEVVLPAVRIAGV
NTWQAKDPEPMLRFLESWEKLLPSSVLHAILDMVVFPKLKDAVDLWEPHRDTVPIHVWVH
PWLPLLGHKLEELYHTIRFKLSNVLGAWHPSDASAYTILSPWKKVFDSASWEQLMHRFIV
PKLQLVLQDFQVNPADQRLDQFNWVMSWASAIPIHLMVDMMDKFFFTKWLQVLYHWLCSN
PNFEEVLNWYKGWKELIPEELHANESIRYQLNCGLDMMNRAVEGMEVVQPGLKENISYLR
VLEQRQFEAQQKAAAAQANLGGTAHMDGIGNEMSLKDVIEAHAQQHGLLFRPKPGRMHNG
HQIYGFGNVSIIVDSLNQKVYAQTEESWSLVSLERLLDMHNSSLTRRR
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggatgattatcaggaaatggaaaggtttggcatggagaaggattatgaggacagtcaa
tggattggcggcgagttctattatcgcaagcgcaaggataagcgcgtccagaccaaagac
gatgtactctatggcatattctctgctgattctgacgatgatgaagacaatgagggctcc
agaaagcgcaggaaagaccaaaaggtcgacctcaccaagcccatcaattttgtctccacc
ggcatcgtcttgcccaaccaggagatggacacaaatttaaagcagcaaaatgatgacctc
ggtgctagcggcgttggaactagtggccttggctttggtgccgctacgggttcaggtttg
ggttttaataatttgaattccggtttgggtttgaataattcgaatttagatccccctggg
ggagaggaggaggatgaggaaaacgacaacaattttctaccaacggcgtttgggaagaaa
ataaaggagggagcagagaggagacagaaggagagggaaaagctcaaattgctgaagcaa
actactatccaatctcgaagtcgaagagattctgaagaatctcagtttggactaggagga
gcaagtggcggcggcggggatgggggcctgggggcctttgagaaacacaccaagggcatt
gggatgaggatgcttaagaacatgggctacaaaggaggtggacttggcaaaaaccagcaa
gggattctcgctcctattgaagccaagttgaggccaaaaaatatgggtatgggttttaat
gattacgaggagactaaaatcaagaggcctggcttgcaagaattggaagctgaaaagccg
agcaagcctttgcccgctgtcagttcctccaccaccaccaaaaagagcctttcctggaaa
aaggccgttgccaacagggctaataaggaccactatgtctctgccaaggagttgttagcc
aagaagcaggaagagagtaccgaggtctttgtgcacaaggtggttgatatgcgcggaccc
caggttcgagtcttgaccaatttggagaatttgaatgccgaagagaaagccagggaagag
gatattcccatgcctgagctacagcacaacctgaggttgattctggacttagctgagctg
gatattcagaagattgatagggatctaaggaatgagagggacacggcgatcagcttgaac
caggagaaagagaggctggcaacggaggtggccagacagaagcaacacttggatagcttg
ggggatattatgaacgtgttagaccgactgggagaagagaatatcatgggagcattgacg
ctggactccctggcaaaggactttggtgacctacagaagagatacgctgacgactataaa
atatgcaacttgtcttgtattgcctgttcttttgctatacctctgtttatcaggatgttt
caaggttgggatcctcttaggaacccgtcccatgggttgaatgtggtatcctcatggaag
ggtttgcttcatggagagggggagagagaacagtaccttgatatttgggataatacaatg
ccaccttatacccagttggtttccgaggttgtgttacccgcagtgaggattgctggcgtc
aatacctggcaggccaaggaccctgaacccatgcttcgctttttggagtcttgggagaaa
ttgctaccctcttctgtccttcatgccatattggatatggtagtctttcccaaactgaag
gacgcagttgacttgtgggaacctcaccgggacactgttcccatccatgtatgggtgcat
ccatggctaccactcttgggacacaagttggaggagttgtatcacacaatacgcttcaag
ttgagtaacgttctcggtgcatggcaccccagtgatgcctctgcctataccatactctcg
ccgtggaagaaggtgtttgattcggccagttgggaacaactcatgcatagatttatagtg
cccaagttgcagcttgtcctacaagacttccaagtgaaccctgcagatcaaagacttgat
cagtttaattgggtgatgagttgggcttctgctattccaattcatctaatggtagatatg
atggataagtttttcttcaccaagtggctacaggttttgtatcactggttatgttcgaac
ccgaattttgaagaggttttgaattggtataaaggttggaaggaactcattcctgaggag
cttcatgcaaatgaaagtatccggtatcagcttaattgtggtcttgacatgatgaatcgg
gctgttgagggtatggaggtggtccaacctggtttgaaagagaatattagctaccttagg
gtgcttgagcaaaggcaatttgaggcacaacagaaagcagcagcagcacaagcaaacttg
ggtggcactgctcacatggatggcattggtaatgagatgagcttgaaagatgttattgaa
gcccatgcacagcagcatggtctgctatttaggcctaaacccgggcggatgcataatggt
caccagatatatggctttggtaatgtaagcataatagttgactctctaaatcaaaaggta
tatgcccaaacagaggaaagctggtctcttgtatcccttgaaaggttgcttgacatgcac
aatagttctcttacaagaagacgctga
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