Prunus dulcis (almond): 117627425
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Entry
117627425 CDS
T07328
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A
KO
K14026
SEL1 protein
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117627425
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Gene cluster
GFIT
Motif
Pfam:
Sel1
DUF7342
Motif
Other DBs
NCBI-GeneID:
117627425
NCBI-ProteinID:
XP_034215415
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Position
5:complement(17571632..17576270)
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AA seq
869 aa
AA seq
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MNFATRKLIFALLIVSLYPLSLFARPYFLVLSQDDLLNTPNSPDDSPPVDSTQNDSPEWD
EFGDSGSPQSEEELDPGSWRPIFEPDPFRPDLANNPDERYYSTVTKLIKSVSSGDTTLMD
DAVSEIEESASRGLPHARSVLGFLYATGQMRKQNKAKAFTYHYFASEGGNMQSKMALAYT
YLFGKAMNFATRKLIFALLIVSLYPLSLFARPYFLVLSQDDLLNTPNSPDDSPPVDSTQN
DSPEWDEFGDSGSPQSEEELDPGSWRPIFEPDPFRPDLANNPDERYYSTVTKLIKSVSSG
DTTLMDDAVSEIEESASRGLPHARSVLGFLYATGQMRKQNKAKAFTYHYFASEGGNMQSK
MALAYTYSRQEMFDKAVKLYSELAEAAVNSFLISKDSPVIEPVRIHNGAEENKEALRKSR
GEEDEDFQILEYQAQKGNSAAMYKIGLFYYFGLRGLRRDHAKALSWFLKALEKGEPRAME
LLGEIYARGAGVERNYTKALEWLTLAAKQELYSAYNGMGYLYVKGYGVEKKNYTKAKEYF
EKAADNEDSGGHYNLGVMYLKGIGVTRDVKLACKYFIVAANAGQPKAFYQLGKMFHTGVG
LKKNLPRATVLYKLVAERGPWNSLSRWALESYLKGDMGKAFFLYSRMAELGYEVAQSNAA
WILDKYGERSMCIGESGFCTDAERHQRAHSLWWQASEQGNEHAALLIGDAYYYGQGTERD
YDRAAEAYMHARSQSNAQAMFNLGYMHEHGQGLPLDLHLAKRYYDQALEIDQAAKLPVTL
ALTSLWIRKNYADGFLVHVIDSLPEVYPKVEEWVDNVLLEEGNATILTLFVCLLTVLYLR
ERQRRHAVAAPGGMAVPHHPNEHVAPAPV
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgcaactcggaaactcatcttcgctctcctgattgtctctctctaccccctc
tctctcttcgctcggccatatttcctcgtcctctctcaagacgacctcttaaacaccccc
aactcgcccgacgactcaccgcccgtcgactcgactcaaaatgactcgcccgagtgggat
gagtttggcgactccggctccccacagtccgaggaggagctcgacccgggctcctggcgc
cccatcttcgagcccgacccctttaggccagacctggccaacaacccggacgaacgctac
tactccaccgtaactaaattaatcaagtccgtcagctccggcgacacgacgctcatggac
gacgccgtttcggagatcgaggaatcagcttcccgcggtctccctcacgcgcggtccgtg
ctggggtttctgtacgctacgggccagatgaggaagcagaacaaagccaaggccttcacg
taccactacttcgcttccgagggtggtaacatgcagtcgaagatggctctcgcttatact
tacttatttggcaaagcaatgaattttgcaactcggaaactcatcttcgctctcctgatt
gtctctctctaccccctctctctcttcgctcggccatatttcctcgtcctctctcaagac
gacctcttaaacacccccaactcgcccgacgactcaccgcccgtcgactcgactcaaaat
gactcgcccgagtgggatgagtttggcgactccggctccccacagtccgaggaggagctc
gacccgggctcctggcgccccatcttcgagcccgacccctttaggccagacctggccaac
aacccggacgaacgctactactccaccgtaactaaattaatcaagtccgtcagctccggc
gacacgacgctcatggacgacgccgtttcggagatcgaggaatcagcttcccgcggtctc
cctcacgcgcggtccgtgctggggtttctgtacgctacgggccagatgaggaagcagaac
aaagccaaggccttcacgtaccactacttcgcttccgagggtggtaacatgcagtcgaag
atggctctcgcttatacttactctaggcaagagatgtttgataaagcagtgaagctgtac
tcggaattagccgaggcagcagtgaatagcttcctaatttcgaaggactcgccggtgatc
gagccagtgaggatccacaatggagctgaggagaacaaggaggcattgaggaagagcaga
ggcgaagaagatgaggactttcagattttggagtaccaagctcagaagggaaactctgcg
gcaatgtataagattggtctcttttactattttgggctgagagggttgaggcgcgaccat
gccaaggcgttgtcgtggtttttgaaggcgttggagaagggagagcctcgggcgatggag
ctgcttggggagatttatgctagaggagctggggttgagaggaattacaccaaggctctg
gagtggcttacactcgcagccaaacaggagctttattcagcctataacgggatgggctat
ttgtatgttaaaggatatggggtggagaagaagaactacaccaaagcaaaagagtatttt
gagaaggctgctgataatgaagactcaggggggcactataacctaggagtaatgtatctc
aaagggattggggtaacgagagatgtgaaacttgcatgtaaatactttatagtggctgct
aatgctggtcaacccaaggcattctaccagctgggaaagatgtttcatactggagttggg
cttaagaaaaatcttcccagggccactgtattgtacaaactagttgcagaaaggggaccg
tggaactccttgtccagatgggcactagaatcatacttaaaaggggacatgggcaaggca
ttcttcttgtattcaaggatggctgagttaggctatgaggtagcgcaaagtaacgctgca
tggattcttgacaaatatggagaacgtagcatgtgcataggagaatccggtttctgcacg
gatgcagaaaggcatcagcgtgctcattcattgtggtggcaagcatctgagcagggtaat
gaacatgctgctttgctgattggggatgcatattactatggtcagggtactgagagagat
tatgaccgtgcagcagaggcttacatgcatgccaggtcccagtctaatgcacaagccatg
ttcaaccttggttacatgcatgagcatggacaagggctgcctttggatcttcatctcgcg
aagcgttactatgatcaagctctagagattgatcaggcagcaaaattgcctgtcacatta
gcccttacaagcttatggatacgaaaaaattatgccgatggtttcctggtccatgtgatc
gattcattgcctgaagtttatcccaaggtggaagaatgggtagataatgtgcttctagag
gaaggaaatgcgacaatattgactctttttgtttgtctcctcactgtcctatatcttcgt
gagcgacaacgcaggcatgctgttgctgccccgggtgggatggctgtgccacaccacccg
aatgagcatgttgcaccagcacccgtatag
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