Prunus dulcis (almond): 117627617
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Entry
117627617 CDS
T07328
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117627617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117627617
03036 Chromosome and associated proteins [BR:
pdul03036
]
117627617
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117627617
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117627617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
117627617
NCBI-ProteinID:
XP_034215664
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Position
5:12221491..12229008
Genome browser
AA seq
1005 aa
AA seq
DB search
MFGSTNPAFGQSSSSPFASQPVFGQTSNTSNNPFVPKPFGSTTPFGAQTGSSIFGGTSTG
VFGAAQSSSPFPSSTTFGAASSSPAFGNTTPSFGAASSAAFNSSPSPFGGSSGFGQKPVF
GAFGSNTTQPSPFGSTTQPSQPAFGSGIFGSTTPFGGSSQPAFGATTTPTAFGGTSSPAF
GATTTPAFGATSTPAFGATSTPAFGATSNTPAFGATSTPPAFGATSSPAFGSTTSPTFGS
TGSAFGVSNSSVFGSTGAFGASSTPAFGSSGSTFGTSSNPGFGASSAPGFGSSSTPSFTF
TSAPAFGQSNSTFGSSSSPFGAQNSPFGAQPTPLGNNTFGQSAFGGQQRGGSRVAAYTET
PEPDGGSGATAAKLESISAMSVYKDKSHEELRWEDYQLGDKGGPAPAGGSAFGMSTAQPN
SLNTASSFPQVSTSPFNTATAPNLFTPKTPSFPSTGFGTSSTPFSSSTFGLSTSTNIFNP
SSSPSGFGQTSSPSLFTSSAPSTFSFSAPAQTSNSTFNTGIFNSTAPVAQTGSTFGLSTT
SFGQNTAPFGQSNAFNTPSTGYGLGSSSTASATSNLMGFSQPTPSFSQPFQSSQPPQNSG
FGFNSFNQTQPGNTGGLGGSVGILGQNNFGQLSATQSSAAVQPVPATNPFGTLPAMPQMS
IGRGGTAPSIQYGISSMPVVDKLAPVRMSSSLVTSRHLTQRRVRLPVRKYYPKNDDQRFP
FFIDDEETVNTPKADALFLPRENPRALVIRPKEQWPLRASAEKASPLKDTSTPVHENETP
HEDGIVKERVNHVKANQKPNGVHDDHSIQKADSYMTLSGHRAGEAAIVYEHGADIEALMP
KLRRSDYYTEPRIQELAAKERAEPGFCCHVKDFVVGRVDYGSIKFFGETDVRRLDLESVV
QFNNREVIVYMDDNKKPPVGQGLNKPAEVTLLNITCMDKKTGRRFTEGPKTEKYKQMLKK
KAEDQGAEFVSYDPLKGEWKFKVSHFSEYKLGDEDDWDVDGAQDC
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttctactaacccagcttttgggcagtcatctagcagcccgtttgcatcccaa
ccggtctttgggcaaaccagcaacacaagtaacaatccttttgttcccaagccttttggt
agcacaactccgtttggtgcccaaacagggagttccatatttggcggcacttcaactggt
gtatttggtgcagctcaatcttcttcaccttttccttcctcaacgaccttcggtgctgct
tcatcttcaccagcttttggaaatacaactccttcttttggagctgcttctagtgcggct
ttcaatagttcaccatcaccttttggtggttcatctggttttggtcagaagcctgttttt
ggagcatttgggtccaatactactcaaccaagtccttttggaagcacaactcagccatca
cagccagcatttgggagtggtatatttggttccaccacaccatttggtggatcaagtcag
ccagcatttggtgctaccaccaccccaacagcctttggtggtacaagtagtccagcgttt
ggtgctacgaccaccccagcgtttggtgctacaagcaccccagcatttggtgctacaagc
accccagcctttggggctactagcaacaccccagcctttggggctactagcaccccccca
gcctttggggctacaagcagtccagcctttggttccacaacaagtcctacgtttggaagc
acaggatctgcattcggggtgtcaaattcctccgtgtttggatctacgggagcatttggg
gcttcaagcaccccagcttttggttcatctggatccacctttggtacttcaagcaatcca
ggttttggtgcgtcaagtgctcctggttttggttcatccagtactccatctttcaccttt
acatcagctcctgcttttggccaatcaaattctacatttggtagttcctcatctccattt
ggagcacagaattctccattcggagctcagccaacaccattggggaacaatacctttggg
cagtcagcttttgggggccaacaacgtggtggtagtagagtggctgcatatacagagact
cctgaaccagatggtggtagtggggctactgctgcaaaattggagtcaatatcagcaatg
tcagtatataaagacaaaagtcacgaagaactacgctgggaggattatcaattgggggat
aaaggtggtccagctcctgctggtgggagtgcctttggcatgtctacggcacaaccaaac
tctttgaatactgcgtcatcatttcctcaagtgtctacaagtccttttaataccgcaacc
gcacctaatttgtttactccaaaaactccatccttcccttctacaggctttggaacatcg
tctacaccattcagttcatcaacttttgggctttctacctcaaccaatatttttaaccca
tcatcatctccctcgggttttggacaaacctcatctccatctctctttacttcatcggcg
ccatccacattttcattttctgctccagctcaaacatcaaattccacatttaatacggga
atattcaattccactgctccagttgcacagacaggtagtacttttggactaagtaccact
tcgtttgggcagaacacggccccatttggtcaatcaaatgcattcaatactccctctact
ggttatggtttgggaagctcctctactgctagtgctacaagcaacctgatgggttttagt
caacctactccttctttttcccagcctttccagtcatctcagcctcctcagaacagtggg
tttggattcaacagttttaatcaaactcagccaggcaatacaggtggcttgggtggttca
gtgggaattcttgggcagaataactttggacaattgtctgctactcaaagctctgcagct
gtacaaccagtacctgctaccaatccatttggaacgctccctgcaatgcctcagatgtca
attggtcgtggtggaactgcaccatcaattcaatatgggatttcaagcatgcctgttgta
gacaaactggcgcctgttagaatgtcatcatctttagtgacttctcgacacctgactcaa
aggcgggtcagattgcctgtgagaaaatattatcctaagaatgatgatcaaaggttccct
ttctttattgatgatgaagaaacagtcaatacccccaaggcagatgctcttttccttccc
agggaaaacccaagagcgctcgtcattcgtcccaaagaacagtggcctttaagggccagt
gccgagaaagcatccccattaaaggatacttctactccggtgcatgagaatgaaactcca
catgaagatggcattgtcaaggagcgtgtgaatcatgtcaaagccaaccagaaacctaac
ggagtccatgatgatcattctattcagaaagcggactcatatatgacactgagtgggcat
agagccggtgaggctgctattgtatatgagcatggcgctgacattgaggcactaatgcca
aagctccggcgctctgattactatacagagcctcgaattcaggaactggcggcaaaggaa
agggcagaacctgggttctgctgtcacgtcaaggattttgtggtcggacgagttgactat
ggtagcatcaagttctttggtgagacagatgtgagacgccttgatctggaatctgtggtg
cagtttaacaatcgggaggtgatagtgtacatggatgacaacaagaaacctccagttggg
caaggcctcaataaacctgctgaggtaacacttctcaacattacatgtatggacaaaaaa
acagggcgccggtttacagaagggccaaaaactgaaaaatacaagcagatgttgaagaag
aaagcggaggatcaaggtgccgagtttgtctcttatgaccccttgaaaggagagtggaag
ttcaaggtaagccacttcagtgagtacaagttgggagatgaagacgactgggatgtggat
ggtgctcaagattgctga
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