Prunus dulcis (almond): 117627624
Help
Entry
117627624 CDS
T07328
Name
(RefSeq) serine/threonine-protein phosphatase PP1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117627624
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pdul01009
]
117627624
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdul03021
]
117627624
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117627624
03041 Spliceosome [BR:
pdul03041
]
117627624
Enzymes [BR:
pdul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
117627624
Protein phosphatases and associated proteins [BR:
pdul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
117627624
Transcription machinery [BR:
pdul03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117627624
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117627624
Spliceosome [BR:
pdul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117627624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
117627624
NCBI-ProteinID:
XP_034215678
LinkDB
All DBs
Position
5:complement(10342239..10346643)
Genome browser
AA seq
320 aa
AA seq
DB search
MDESVVDDLIRRLVSAKNGRTTKQVQLTEAEIRQLCSASKEIFLSQPNLLELEAPIKICG
DVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLSYKIKYKENFFLLRG
NHECASINRIYGFYDECKRRFNVRIWKTFTDCFNCLPVAALIDEKILCMHGGLSPDLKNL
DQIRNIARPVDVPDQGLLCDLLWADPDKDVEGWGENDRGVSYTFGADKVAEFLQKHDLDL
ICRAHQVVEDGYEFFGKRKLVTIFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKG
KLGVGNNMLRPGTPPHKGKG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggacgagagtgttgttgacgatcttatacggaggcttgtctcagcgaagaatggccgg
accaccaaacaggtgcagctcacggaggccgaaataaggcagctttgctccgcttccaag
gagatctttctcagccagccgaatcttcttgagcttgaagctccgataaaaatttgcgga
gatgttcatggtcagttttccgatcttttgcgattgtttgagtatggtgggtacccacct
gaggccaattatttattcctaggggactatgtcgatcgtggtaagcagagcatagagaca
atatgccttctcctttcctataagatcaaatacaaggagaacttctttctccttagaggc
aaccatgaatgtgcttccatcaaccgcatatatgggttctatgatgagtgcaagagaaga
tttaatgttcgcatttggaagacatttactgactgcttcaactgtcttccagttgcggca
cttattgatgaaaagatcctttgcatgcatggtggtctttctcctgatttgaaaaacttg
gatcagattaggaatattgcccggccagtggacgtgccagatcagggccttctctgtgat
ctattatgggctgatcctgataaagatgttgaaggttggggagagaatgaccgtggcgtg
tcctatacttttggtgctgacaaggttgctgagttcctccagaaacatgaccttgatctc
atttgccgtgctcatcaggttgtggaagatgggtatgagttttttggaaagcggaagctg
gtgacaatattctcagcaccaaattactgtggggagtttgataatgctggtgccatgatg
agtgtagatgatacattgacatgttccttccagatcttgaaagcatccgagaagaaagga
aagcttggagtaggcaacaacatgttaagaccaggaactccacctcataagggtaagggc
tga
DBGET
integrated database retrieval system
