Prunus dulcis (almond): 117627751
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Entry
117627751 CDS
T07328
Name
(RefSeq) LOW QUALITY PROTEIN: phenylalanine--tRNA ligase beta subunit, cytoplasmic-like
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117627751
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pdul01007
]
117627751
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdul03016
]
117627751
Enzymes [BR:
pdul01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
117627751
Amino acid related enzymes [BR:
pdul01007
]
Aminoacyl-tRNA synthetase
Class II (U)
117627751
Transfer RNA biogenesis [BR:
pdul03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117627751
Prokaryotic type
117627751
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
tRNA-synt_2d
EAD7
Motif
Other DBs
NCBI-GeneID:
117627751
NCBI-ProteinID:
XP_034215872
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Position
5:complement(4256345..4261464)
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AA seq
589 aa
AA seq
DB search
MPTVSVGRDRLFAALGRTYTQEEFEEVCFSFGIELDDVTTEKAIIRKEKHLDDDAVDEDE
EVIYKIEVPANRYDLLCLEGLAQALLVFSREEEVPTYKLANLSKESMIKMHVKPETSSIR
PHVVCAVLRGVTFTEASYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTLQAPFTYEALPP
SSINFVPLKQAKNFGADELMEFYRSDLKLKKFLHIIENSPVFPVLYDNNRTVLSLPPIIN
GAHSAITLKTKNVXIECTATDLTKAKIVLNTIVTAFSAYCERKFEIEPVEVIYSDGKSYI
YPDLSIYNMDVSLSYVNGTIGVSLEAEEVTDLLNRMQLRAEQSVSGDITVFVPPTRSDIL
HPCDVMEDVAIAYGYNNIPKRKPASLKPLALNELTERIKLEIAMDGFTEVLTFILGSWRE
NFAMLNRKDDKSKAVVVGNPRSSDFELVRTSLMPGVLKTVGHNKDHPKPIKIFEVGDIAL
LDEKKDVGATNRRQLAALFCGATSGFELIHGLVDRVMESIGAAFVPIGDDSGYFIKPSDE
PEFLPRRQASIIYKGKNIGTFGIVHPEVLNNFDIPDPCSFVELNIESLL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccgtcagcgtgggacgggatcgtctgtttgcagcactaggaagaacttacact
caggaagagtttgaagaagtatgcttcagtttcggcatcgagctggacgacgttacaact
gagaaagcaattattagaaaagaaaagcatttggacgatgatgcagttgacgaagatgaa
gaagttatttacaaaatcgaagttcccgcaaatagatacgatttactttgccttgaaggg
ctggctcaagcactccttgttttcagtagggaagaggaggttcctacatacaagttggcc
aaccttagtaaggagtccatgattaaaatgcatgtaaaaccagagacatcttccattcgc
cctcatgttgtctgtgctgttttaagaggcgttaccttcactgaagcaagttataacagc
ttcattgatctccaagacaagcttcatcaaaatatctgccgacgaagaacactagttgcc
attgggactcatgacttggatacattgcaagcccctttcacatatgaggctttgccacct
tcaagtataaattttgtgcctctgaaacaggcgaagaacttcggagctgatgagctcatg
gaattttacagatcggatttgaaactgaagaaatttttgcacataatagagaactcgccg
gtgtttcctgttttatatgataacaacagaactgttttgtctttaccgcccattattaat
ggtgcacattcagcaatcactttgaagacgaagaatgttntcatagaatgtacagctact
gatctgacaaaggccaagattgttctgaacacaatagtgacagcgttttcagcatattgt
gaaagaaagtttgagattgaacctgttgaagtgatatattctgatggaaagtcatatatc
tatcctgatttatcaatctacaacatggatgtttctctatcatatgttaatggtacaatt
ggagtctctttggaagcggaagaggttactgacttgttgaatcgaatgcaattgcgtgcc
gagcagtctgtatcaggcgatatcactgtatttgtacctcccactagaagtgacattctt
catccttgtgatgttatggaggatgttgcaattgcttatggatataataatatcccaaag
agaaagcctgcatctttgaagccactagccttgaatgagctcactgaacgcataaaattg
gagattgcaatggatggtttcacagaggtcttgacatttatattgggctcatggagagaa
aattttgccatgttaaatcgtaaagatgataaatcaaaggcagtggttgttggaaatcct
cgatcatctgattttgaacttgttcgaaccagtctgatgcctggtgtattgaaaactgtt
ggtcacaacaaagatcatccaaagcccataaagattttcgaagtgggtgatatagcacta
ttggatgagaagaaagatgttggtgcgacaaatcgacgccaactagcagctctattctgt
ggtgctacctctggatttgagttgattcatggcttggtggacagagttatggaatcaatt
ggtgctgcttttgttcctattggtgacgacagtgggtacttcataaaaccttcagatgaa
cccgagtttcttccgcgtagacaagcaagcatcatttataaagggaagaatattggaact
ttcggcattgtgcacccagaggtgttaaacaacttcgacattcctgatccgtgctccttt
gtagaacttaacattgagagtttgctgtag
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