Prunus dulcis (almond): 117627783
Help
Entry
117627783 CDS
T07328
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117627783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdul03400
]
117627783
DNA repair and recombination proteins [BR:
pdul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
117627783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
117627783
NCBI-ProteinID:
XP_034215915
LinkDB
All DBs
Position
5:complement(4980361..4985795)
Genome browser
AA seq
1218 aa
AA seq
DB search
MDYNAPVAKRTRLSEEKYWKELWEKRAGKRKLRDGSDKKGKSRKGSNVWDCVSVDDSEEN
EEVTVSLSTGGKDKKKGGKRKSAEGSKKQRSGCDDSDEGDDPSVEIISESSFGKQDNESL
GFDSVESAGSNGKKSNSGAVDMENFFPVEVEDSDDEVVYLGEEKVGGFGCLSSERSDACE
DAASDGDTEDAASDASDESWKSSSREDSIFHASDESDDEAFEPENSESSVFSESLNSCGE
EGHDDEREVTKRSGKPRKGKNVEGDVEVKKGQDIDASEIAKGSGKAEKGKSVEIGVRRKR
RVGLDMSVDADDDIDSNKDDPIHSAQEFNSVAKRTRSRVSPRSENKRIESVTVNDNEDSS
SGHDNDNEDVDDANCSGPRTRCHEKKTGSDDDRRNDESDKTYGGSSETERSKWNDVHGVC
KKNKRDIGNLTNRRSMWAKEDCNVLKILVDSIYEKGEGTLKGSVSFGDEGRKDERNPPES
EMTTLPLKFSFGEQSTVPKKSECDPEEKELWDDLEFALRASEIDSSDSNVVESQDSLPIA
DEVETVASLCRRGVHQLILDEEIGLRCKFCSYLDQEIKYILPDFLDCPYGRFGTRGSETD
NRSIFDELQSHASDSDRHSGYNSHPHVDGTVWDLIPGVKSSMYPHQCEGFEFIWNHIAGG
IRLDKLKRPSSVVGGNGCIISHAPGTGKTRLTIVFLQTYMKLFPECRPLLIAPRSMLLTW
EEEFKKWKLDIPFHNLNNWELSGKENQTAVNYVMQAQRRKSVNIESRRMLKLYSWRKKRS
ILGISYRLFEQLSGAQKTGSVDEMGKILLEFPGLVVFDEGHTPRNDQSHMWKALSEIKTK
RRILLSGTPFQNNFQELFNTICLVRPTFAASIESTKFSRDLPRNRGRKSNGEKWKWTSLA
SSSGKVVDDKEKHATEVKAQIAPFVHVYKGSVLQDSLPGLRNSVVVLHPTQLQERFHKRI
QVVKELFRYENLEALISFHPSLLLKEDAFSADQGRLQELKLNPDAGVKAKFVMELIRLSD
ALKEKVLVFSQYIDPLNLTRDLLKSQFQWTEGEEVLYMDGKSDMKQRQSSMKVFNDPSSK
AKVLLASTKACSEGISLVGASRVVLLDVTWNPSVERQAISRAYRLGQKKVVFVYHLLMDG
TNEEHKYSRQVDKSRLSELVFSDSDKKKVLEKEIGATVSEDKILQEMAQHGKLKHLFKSI
ALLHEDIYFEQLGLSTFG
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggactataacgcacctgtagcaaagaggacgcggttaagtgaagagaaatactggaag
gagttatgggagaaaagggctgggaaacgaaaactccgtgatgggtctgataagaagggg
aaatcacgtaaagggtccaatgtatgggattgtgtctctgtggatgactctgaggagaat
gaggaagtcactgtgagtctatcgacgggaggcaaggacaagaaaaagggtgggaaaaga
aaatctgctgaggggtctaagaaacagaggtctggttgtgatgattctgatgagggtgac
gatcccagtgttgaaatcattagtgaaagttcatttggaaagcaagacaatgagtctctg
ggttttgatagtgttgagagtgcaggatcaaatggaaagaagtctaactctggtgccgtg
gacatggagaatttttttccagttgaagtggaggatagtgatgatgaggtggtgtatttg
ggtgaagagaaagtaggaggttttggttgtttgagttcagagaggagtgatgcctgtgag
gatgctgcttctgatggcgacactgaggatgctgcttctgatgcctcagatgaatcttgg
aagagtagttctagggaggattctatttttcatgcctcagatgaatcagatgatgaggct
tttgaaccagaaaactcagaaagttctgtattttctgagtcgttgaattcatgcggtgaa
gaggggcatgatgatgaaagagaggttaccaagagaagtgggaaaccaagaaaggggaaa
aatgttgagggtgatgttgaggtgaagaaggggcaggacattgatgctagtgagattgca
aaaggaagtgggaaagcagaaaaggggaaaagtgttgagattggtgtgaggagaaagaga
agggttgggttggatatgtcagttgatgcagatgatgacattgatagcaacaaagatgat
cctattcattctgctcaagagtttaatagtgtggcaaaacgaactcgttcacgagttagt
ccaagaagtgaaaataagagaatagaatctgtaactgtaaatgataatgaggattcttct
tctgggcatgataatgacaatgaggatgttgatgacgccaattgcagtggtccgagaact
aggtgccacgaaaagaaaacagggtctgatgatgatagaagaaatgatgaaagtgacaag
acctatggtggtagttcagaaactgagcgtagtaaatggaacgatgtccacggagtgtgc
aagaaaaataaaagggatatcgggaatcttactaacagacggtccatgtgggcaaaggag
gattgcaatgttttaaagattcttgtagattccatttatgagaagggagaagggacactg
aaagggtcagtttcctttggagatgaaggccgtaaagatgaaagaaatccaccagaatct
gagatgacaactcttccacttaagttcagttttggagagcagtcaactgtaccaaagaag
tcagagtgtgatccagaagaaaaagaactatgggacgaccttgaatttgctctcagagct
tctgagatagattcctctgattctaatgtggttgaaagtcaagattcactccctattgct
gatgaagttgaaacagtagctagcctctgtaggcgaggggttcatcagcttatacttgat
gaagagattggactcagatgcaagttttgctcatatttagatcaggagatcaagtatatt
ttaccagacttccttgactgcccttatggaagatttggcacaagaggctccgaaacagac
aaccggtctatctttgatgagcttcaatctcatgcttctgattctgatcgccattctggc
tataattctcatcctcatgttgacggcacagtgtgggacttaattcctggtgttaaaagt
agtatgtatccccatcagtgtgaaggttttgagtttatctggaaccacatagccggtggc
attcgtcttgacaagttgaaaaggccaagtagtgttgttggtgggaatggatgcatcata
tcacatgctcctggaacaggcaaaactcgcctgaccattgtctttctccagacatacatg
aagttattcccagaatgcaggccgcttttgattgctcctcgtagcatgctccttacgtgg
gaagaggagtttaaaaaatggaagcttgacattccatttcacaatcttaacaactgggag
ttatctggcaaagaaaatcaaacagctgtaaattatgtgatgcaagctcaacgcaggaaa
agtgtcaacatagaaagcagacgaatgctgaagttgtattcctggagaaagaagagaagc
atcctggggattagttaccggctgtttgagcagctttctggagcacagaaaactggctca
gttgacgaaatggggaaaatccttctcgagtttcctggtcttgtagtgtttgatgaagga
cacactcctcggaatgatcaaagtcatatgtggaaggctttgtcagaaatcaaaacaaaa
aggcgcattcttctctctggaactccgtttcagaataattttcaggagctcttcaataca
atttgcctcgtgaggccaacttttgcagcctcgattgagtctactaaattcagtagagat
cttcccagaaaccgaggccggaaaagcaatggagagaaatggaaatggacttctctggcc
agcagtagcggaaaagttgttgatgacaaagaaaaacatgctacagaggtcaaagctcag
attgcgccatttgtccacgtctacaaaggttctgtgctgcaagatagtcttcccgggtta
aggaactcagttgttgttttacacccaacccagctacaggagaggtttcataagagaatt
caagtggtgaaggaactgtttcgatatgaaaacctagaggctttaatatcttttcatcct
tccctcttgcttaaggaagatgcattttctgctgaccaggggaggttacaagagcttaaa
ttaaatcctgatgctggggtgaaggcaaaatttgtgatggaactcatccggctcagtgat
gctttgaaagaaaaagttcttgttttcagtcagtacattgatcccttaaaccttacaagg
gatcttctgaaatctcaatttcagtggactgaaggggaagaggtgctgtatatggatgga
aaaagtgatatgaagcagcgtcaatcctcaatgaaggttttcaacgatccatctagcaaa
gccaaggtattactagcttcaactaaagcatgttctgaaggcataagccttgttggagct
tccagggttgtgttgctggatgtcacatggaatccatctgtggagaggcaggcaatatcc
cgtgcctacaggctgggacagaagaaggttgtgtttgtctaccatctcctcatggacgga
actaacgaggagcataaatacagtcgccaagttgacaagagtcgtttgtctgagttggtg
ttttctgattcagacaagaagaaggttcttgagaaggaaatcggagccacagtttctgag
gataaaatcttgcaagagatggctcagcacgggaaactgaagcacctatttaaaagcata
gctttactgcatgaagacatatactttgagcagctaggcctgtcaacttttggttaa
DBGET
integrated database retrieval system
