Prunus dulcis (almond): 117628201
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Entry
117628201 CDS
T07328
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdul04131
]
117628201
04121 Ubiquitin system [BR:
pdul04121
]
117628201
Enzymes [BR:
pdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117628201
Membrane trafficking [BR:
pdul04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
117628201
Ubiquitin system [BR:
pdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117628201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-RING-like
Rad50_zn_hook
zf-RING_16
zf-HC5HC2H
zf-RING_10
VPS18_RING_C
Zf_IFT144_1st
PHD_NSD
zf-RING_Vps41
Anti-TRAP
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
117628201
NCBI-ProteinID:
XP_034216482
LinkDB
All DBs
Position
5:18044797..18048280
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AA seq
380 aa
AA seq
DB search
MSSSGGNSGSVGGPIAPPQLYFCHQCDRTVSLNPPPTSDLVCPICSGGFVEEMEASNPNP
FPPNPFFSVPSSDAPPFASSGFPLLFSSPGPGNFSDDLSALFGGAPSRSSPFQDPDAFNP
FVFLQNYLQTLRANGANVQFVIDNNPGAGGDPAGFRVPPNLNLGDYFFGPGLEQLIQQLA
ENDPNRYGTPPASKSAVEGLPVVKISKELLDSDSSQCAVCKDLFELGEEAKQMPCKHIYH
SDCILPWLELHNSCPVCRYELPTDDTDYEQRLSGASANANRANQSAAAGGVNIFAGVGGG
GSGSGSGIGIGIGAPSLDNQSPTPRTVERRFTISLPRLFRVFGGSAETSNSGSGNNDESN
SGNRGGHNSGSEEPRHEDLD
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctcgggcggcaactccggcagtgttggtggcccgatcgctcctcctcagctt
tacttttgccaccagtgcgatcgtacggtttccctcaaccctccacctacctccgatctc
gtttgccctatttgcagcggtggtttcgtcgaagagatggaagcctctaaccctaaccct
ttcccccccaatcccttcttctccgtcccctcctccgacgctcctcccttcgcctccagc
ggctttcccctcctcttctcctcccccggccctggaaatttctctgacgacctctctgcc
ctcttcggcggcgcaccctcacgctcctcgccgtttcaggaccccgacgccttcaacccc
tttgtgttccttcaaaactatttgcaaaccctaagagcaaatggtgccaatgtccagttc
gtgatcgataacaaccctggcgccgggggggacccggcaggttttcgcgtcccccccaat
cttaatctcggcgactacttcttcggcccgggcctcgagcaattgatccagcagctcgcg
gagaacgacccaaaccggtacggcacgccgcctgcttcgaaatccgcggtggagggcttg
ccggttgtgaaaatctcaaaggagttgttggattccgattcgtcccagtgcgctgtgtgt
aaggacttgttcgagctcggcgaggaggccaagcagatgccctgtaagcacatataccat
tcggattgcattctgccttggctggaattgcacaattcatgtcctgtttgtcgctatgag
ttgcccaccgatgatactgattacgaacagaggcttagcggggcctccgccaatgccaat
cgagctaatcaatctgcggcggctggtggggtcaatatttttgccggagttggtggtggt
gggagtgggagtgggagtgggattgggattgggattggtgcgccatctctagacaatcag
agtccaactccccgaacggtggagcggagatttaccatctccttgccacgccttttcagg
gtatttggtggttctgctgagactagtaatagtgggagtggaaacaatgatgagtcgaac
tcggggaataggggaggtcataactctggatcggaggagcctaggcatgaagatcttgat
taa
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