KEGG   Prunus dulcis (almond): 117628369
Entry
117628369         CDS       T07328                                 
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
  KO
K12897  transformer-2 protein
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117628369
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pdul01009]
    117628369
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pdul03041]
    117628369
Protein phosphatases and associated proteins [BR:pdul01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117628369
Spliceosome [BR:pdul03041]
 Common components
  Common spliceosomal components
   SR proteins
    117628369
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 117628369
NCBI-ProteinID: XP_034216690
LinkDB
Position
5:complement(10080138..10083997)
AA seq 208 aa
MPYPRERRSASPHSSPSPVRGRRSRSLSRSRRSRSRSQSVDASNPGNNLYVTGLSTRVNS
SDLEKFFNKEGKVLECHLVTDPRTRESRGFGFVTMETVEDAERCVKYLNRSVLEGRLVTV
EKAKRKRGRTPTPGRYQGLRDKRDAGRDHDRDRRRSRSYSPRRLPDRDPYSRDRRGRSRS
PYSRRVDEHSDSYRRRRERSLSGGRNPR
NT seq 627 nt   +upstreamnt  +downstreamnt
atgccatacccaagagaaagaaggtctgcttcaccacacagctccccttcacctgtaaga
ggccgccggtcaagatcattgtcgaggtctaggagaagtcgctctaggagccaatctgtt
gatgcatccaatcctggaaacaatttgtatgtaacaggcttatccacaagggtcaactcc
agtgatcttgaaaaattctttaacaaagaagggaaggttctggagtgccatctggttaca
gaccctcgcaccagagaatctcgtggatttgggtttgtcacaatggaaactgttgaggat
gcagaacgctgcgtcaaatatttgaatcgttctgtgcttgaaggtcgattagtaactgtg
gaaaaggcaaaaaggaagcgagggaggacaccaactccaggaaggtatcaaggtttaaga
gataaaagagatgcaggacgtgatcatgatcgtgatcgtagacgatctcgtagctattca
ccgcgtcggttgccagacagagatccttattccagggaccgtcgaggaagatcacgctct
ccatacagtaggagggtggatgaacattcagactcgtacaggaggcgcagggagcgatcc
ttgtcaggtggcagaaaccctagatag

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