Prunus dulcis (almond): 117628369
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Entry
117628369 CDS
T07328
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
KO
K12897
transformer-2 protein
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117628369
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pdul01009
]
117628369
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdul03041
]
117628369
Protein phosphatases and associated proteins [BR:
pdul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117628369
Spliceosome [BR:
pdul03041
]
Common components
Common spliceosomal components
SR proteins
117628369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
117628369
NCBI-ProteinID:
XP_034216690
LinkDB
All DBs
Position
5:complement(10080138..10083997)
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AA seq
208 aa
AA seq
DB search
MPYPRERRSASPHSSPSPVRGRRSRSLSRSRRSRSRSQSVDASNPGNNLYVTGLSTRVNS
SDLEKFFNKEGKVLECHLVTDPRTRESRGFGFVTMETVEDAERCVKYLNRSVLEGRLVTV
EKAKRKRGRTPTPGRYQGLRDKRDAGRDHDRDRRRSRSYSPRRLPDRDPYSRDRRGRSRS
PYSRRVDEHSDSYRRRRERSLSGGRNPR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgccatacccaagagaaagaaggtctgcttcaccacacagctccccttcacctgtaaga
ggccgccggtcaagatcattgtcgaggtctaggagaagtcgctctaggagccaatctgtt
gatgcatccaatcctggaaacaatttgtatgtaacaggcttatccacaagggtcaactcc
agtgatcttgaaaaattctttaacaaagaagggaaggttctggagtgccatctggttaca
gaccctcgcaccagagaatctcgtggatttgggtttgtcacaatggaaactgttgaggat
gcagaacgctgcgtcaaatatttgaatcgttctgtgcttgaaggtcgattagtaactgtg
gaaaaggcaaaaaggaagcgagggaggacaccaactccaggaaggtatcaaggtttaaga
gataaaagagatgcaggacgtgatcatgatcgtgatcgtagacgatctcgtagctattca
ccgcgtcggttgccagacagagatccttattccagggaccgtcgaggaagatcacgctct
ccatacagtaggagggtggatgaacattcagactcgtacaggaggcgcagggagcgatcc
ttgtcaggtggcagaaaccctagatag
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