KEGG   Prunus dulcis (almond): 117628773
Entry
117628773         CDS       T07328                                 
Name
(RefSeq) recQ-mediated genome instability protein 1 isoform X1
  KO
K10990  RecQ-mediated genome instability protein 1
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    117628773
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdul03400]
    117628773
DNA repair and recombination proteins [BR:pdul03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     117628773
   FA (Fanconi anemia) pathway
     117628773
SSDB
Motif
Pfam: RMI1_C RMI1_N_C RMI1_N_N
Other DBs
NCBI-GeneID: 117628773
NCBI-ProteinID: XP_034217189
LinkDB
Position
5:12904326..12908451
AA seq 705 aa
MLRRRLRLSYSSDEEEQPQPQQHQNEEPQQQSSAVTHPPVTLAPPNPYPSEPLPITDDDD
EFIDVSDNLSSPSPEPSPEPESDNRPHHPPPAQDPAPEPINRPPPPPPPPPSPSPPSSGG
CPISEHLQGLGLRLKREWLDACVHGLQQSVPGFQNFDVETKAKLCFEQFLVSDMNLSGGG
VLPENVASLHLVDLPGPYVLQVDEIVNISNPLKIRYQKAAVGLKRCLKLSITDGVQRVFA
MEYRPIQALEALAPAGLKVALCNVHIRHGLLMLVPESVEVLGGLVEELDAARQRLVDEVN
KPPRGNRTRNGVVPPLATRLTLAAWPPNGVHDAGHTNSSTMEAPTPFQASNQGATFSVSA
RNTSSVSSRNTSPVTAEESTVPLSGEHSVVNPSSTDVFGVEEMPMDTTPYSRRNAIPNPL
SDDFGVENLHINSAGHSRESRVPENAIPNPSFEDALDVEDVEMDAIHIGGENHTSDSILN
DEDINMINEGETHGGYPSSDTILNDEDINVVSEVERQEILSGDHEPPFSYLCSLSAKLAM
MKNTHSIQGKVKCVLTGVKKFQYTHTYELQAYVDDGTLIKEILVDHNVVQEGIGHSPEEV
KAAISSPDKTIVRNMKEKMKQFQKFLTNFEGIMLIEMRLHDLPIALEMKQGCNQSDAWLL
LRRIKASPPARASGHASSAARTSQYPSSPARTSQHLSSHPIDISP
NT seq 2118 nt   +upstreamnt  +downstreamnt
atgctcagaagacgtctcaggctcagctactcttccgacgaagaagaacaaccacaacca
caacaacaccagaatgaagaacctcagcagcaatcgtcagctgtcactcacccacccgtt
accctagcccctccaaacccttacccctccgaaccgctcccaatcaccgacgacgacgac
gagttcatcgatgtctccgacaacctctcgtctccgtcacctgagccgtctccggaaccc
gagagcgacaatcgaccacatcatcctccgccggctcaggatccggcaccggaacccatt
aaccggccgcctccacctccccctccacctccatctccatctccaccgagctccggcggg
tgtccgataagcgaacatctccaggggttagggttaaggctaaagagggagtggcttgat
gcttgtgtccatggactccagcaatccgtaccgggatttcaaaattttgatgtggagacg
aaggcgaagctctgcttcgagcagtttttggtttcggatatgaatctgtcaggcggaggc
gtgcttccagaaaatgtggcttctctccatctcgtcgatcttcccggaccttatgtgttg
caggttgatgagattgttaatatcagcaatcctctcaagattaggtatcagaaagccgct
gttggactgaagaggtgtctcaagttgtctataacagacggtgttcaacgcgtctttgcc
atggaatataggcctattcaggcgcttgaagctttggctcctgctggtttgaaggttgct
ctgtgtaatgtgcatatacgccacggacttcttatgctggtccctgaatctgttgaagtt
ctaggaggattagttgaggaactggatgctgcacgtcaacgccttgttgatgaagtaaat
aagccacctagaggaaacagaaccaggaatggagtggttcctcctctagctacaaggtta
actcttgctgcatggcctcctaacggtgttcatgatgctggacacaccaatagttcaaca
atggaagccccaaccccatttcaggcgtctaaccaaggtgctacattctctgtatcagcc
agaaataccagctccgtatcttctagaaacaccagcccagtgactgccgaagaatctact
gttcctctcagtggagaacactctgttgttaacccatcatctactgatgtatttggtgtt
gaagagatgcctatggatactactccctatagcagaagaaatgctattcccaacccatta
tctgatgattttggtgttgagaatctccacataaatagtgctggtcatagcagggaaagt
cgagtacctgaaaatgccattcctaatccatcctttgaggatgctttggatgttgaagat
gtcgaaatggatgccattcatattgggggagaaaaccatacctcagattctattttgaat
gatgaagatatcaatatgattaacgagggcgaaactcatgggggttacccatcgtctgat
actattttgaatgatgaggatatcaatgtggttagtgaggtcgagcgccaagaaatactt
tctggagaccacgaaccacctttcagttacctttgtagtttgtcagccaagttagctatg
atgaagaacacacattcaatccaggggaaggttaagtgtgttttgactggtgtgaagaaa
ttccaatacacacatacatatgagcttcaggcgtatgttgatgacggcactctcattaaa
gaaattctcgttgatcacaatgttgtacaggaggggataggtcattctcctgaggaggtc
aaagctgccatttcttctccagacaaaacaatagtccgtaacatgaaggagaaaatgaag
cagtttcaaaaattcttaacaaattttgagggcataatgcttatagagatgagattgcat
gatcttccaattgcccttgagatgaagcagggttgtaatcaatctgatgcgtggttgctt
ttgaggagaataaaggcctcccctccagctcgggcatcagggcatgcctcctctgcagct
cggacatcacagtatccttcctctccagctcggacttcacaacatctctcctcccacccc
attgatatatccccctga

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