Prunus dulcis (almond): 117628799
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Entry
117628799 CDS
T07328
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdul03036
]
117628799
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
117628799
REST complex
117628799
Heterochromatin formation proteins
Other heterochromatin formation proteins
117628799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
117628799
NCBI-ProteinID:
XP_034217218
LinkDB
All DBs
Position
1:complement(23713165..23722826)
Genome browser
AA seq
1444 aa
AA seq
DB search
MKRSREDVFMTSQLKRPMVSSRGEPSGQPQMMGGAAAQKLTTSDALAYLKAVKDIFQDNR
DKYEEFLEVMKDFKAQRIDTAGVIERVKDLFKGHRELILGFNTFLPKGYEITLPLEDEQQ
PPQKKPVEFEEAINFVNKIKTRFQGDDHVYKSFLDILNMYRKENKSITEVYQEVAALFQE
HSDLLVEFTHFLPDTSGTASIHFAPSHRNAMLRDRSSAMPPMRQMHVDKKERTMGSYADH
DLSVDRPDPDHDRALMKVDKEQRRRGEKEKERREDRERRERDRDDRDFDHDGSRDFNMQH
FPHKRKSARRTEDLATEQLHPGGEGDENFAEHLISSSYDDKNSAKSMYGQEFAYCDKVKE
KLRNPDDYQEFLKCLHIFSKEIITRSELQSLVGDLLGRYPDLMDGFDEFLACCEKKDGFL
AGVMSKKSLWNEGHLPRSVKVEDRDRDRDRERDDGVKDRERETRERDRLEKNGASGNKEV
GGQKIYIFSSKDKYLAKPINELDLSNCERCTPSYRLLPKNYPIPSASQRTELASEVLNDH
WVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKINNNT
IKMDSPIRIEEHFTALNLRCIERLYGDHGLDVMDVLRKNGPLALPVILTRLKQKQEEWAR
CRSDFNKVWADIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLAEIKEISEKKRKEDDVLL
SIAAGNRRPIIPNLEFEYPDPEIHEDLYQLIKYSCGEVCTTEQLDKVMKIWTTFLEPMLG
VPTRPQGAEDTEDVVKAKNHTGKHGTVSAGDTDGSPGGGATATNSKQLNSSRNGDESIQP
EQSSSCRTWAVNGANGVKDESSLDIDRAACKGDTFCNTSQQGKVQSNASTADEASGVSKQ
DNSNERLVNSNLSPPGLEQSNGRTNQENSSGLSPTPSRPGNGTVDGGLELPSSEGGDSTR
PVISSNGAIGEGTKGLRYLEESARHFKIEREEGEISPNGDFEEDNFANYREAGLGAVQKP
KDGVVGRQYQARHAEEEICGGETGGENDADADDEGEESAQRSSEDSENASENGDVSGSES
GDGEECSREEREEDVDNDEHDTKAESEGEAEGMADAHDVEGDGISLPLSERFLLTVKPLA
KHVPPALHDKEKDSRVFYGNDSFYVLFRLHQTLYERIQSAKTNSSSAERKWRASNDMSPS
DSYARFMNALYNLLDGSSDNTKFEDDCRAIIGTQSYVLFTLDKLIYKLVKQLQTVASDEM
DNKLVQLYAFEKSRKPGRFVDVVYHENARVLLHDENIYRIECSSLPTRVSIQLMDFGHDK
PEMTAVSMDPNFSAYLHNEFLSVLPDKKEKSGIFLKRNKCAYGSSDELSAICEAMEGLKV
TNGLECKIACHSSKVSYVLDTEDFLFRTKRKRKTLHRDSSCQKLARSSNGSSRVERFHLL
LSGS
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggtccagagaagacgtttttatgacctcacaactcaagcggcctatggtttcc
tctcgaggagagccttcggggcaaccccagatgatgggcggagcagctgcccagaaacta
acaacaagtgatgccttagcatatctaaaggctgtgaaggatatatttcaagacaacagg
gataaatacgaagaatttcttgaagtcatgaaagactttaaggcccaaagaattgacact
gcgggtgtgatagagagggtgaaggatttatttaaagggcatcgagagctaattttaggt
ttcaataccttcttgccaaagggatatgaaatcaccctcccacttgaggacgagcaacag
cctcctcaaaagaagcctgttgaatttgaagaagctatcaatttcgtgaacaagattaag
acccgatttcaaggcgatgaccatgtttataaatcttttttagacattctgaatatgtac
agaaaggaaaacaagtccatcacagaggtttaccaggaggttgcagcacttttccaagaa
cactcagacttacttgtggagtttactcactttttacctgatacttcaggaacagcctcc
attcactttgctccatcgcatagaaacgcaatgctccgtgataggagctctgctatgccc
cctatgcggcaaatgcatgttgacaagaaagaaaggaccatgggttcttatgctgaccac
gatctcagtgttgaccgtcctgatcctgaccatgatagagctctgatgaaagtggacaaa
gagcaaaggaggcgtggtgagaaggagaaggagaggagagaagatagagaaagacgagaa
cgtgaccgggatgatagagatttcgaccatgatggcagtagggacttcaacatgcaacat
tttccccacaaacggaaatctgctcgtaggactgaagacttggctactgaacaattgcat
ccaggtggggaaggcgatgaaaactttgcagaacatctcatttcatcctcttatgatgat
aaaaattctgccaaaagtatgtatggccaggagtttgcttactgtgacaaggtgaaggag
aagttacgaaatcctgatgattaccaggaatttctgaagtgcctccatatttttagcaag
gaaattattacaagatccgaattgcagtctctggtgggtgatttacttggaaggtatcca
gatcttatggatgggtttgatgaatttttggcatgttgtgagaagaaagatgggttcctt
gctggtgtcatgagtaaaaagtccttgtggaatgaaggacatttacccagatcagtgaag
gtagaggatagggatagggatagagatcgtgaaagggatgatggggttaaagatagagag
cgtgaaacacgagaaagggatcgacttgagaaaaatggtgcgtctggaaataaagaagtc
ggaggccagaagatttatatattttctagcaaggataaatacttggcaaaacctattaat
gagcttgacctctctaactgcgagcgctgtactccaagctatcgtctccttccaaagaat
tatccaataccttctgctagccaaagaacggagcttgcttctgaagttttgaatgatcat
tgggtatccgtcacttctggaagtgaggattactcttttaaacacatgcgcaaaaaccag
tacgaagaaagcctgtttcgttgtgaggatgataggtttgaactggatatgttgttagag
tccgtgaatgtaacgaccaagcgtgttgaagaacttttagaaaagatcaataacaatacg
atcaagatggacagtccaatccgtattgaagaacacttcacagctctgaatctgaggtgc
attgagcgattatatggtgaccatgggcttgatgtgatggatgtgttgagaaaaaatggt
ccattagctttgcctgttatattaacccgtttgaagcaaaagcaagaagagtgggcaagg
tgtcgttctgattttaataaagtttgggctgatatatatgccaagaactatcacaagtca
cttgatcatcgtagcttctacttcaagcaacaggacacaaagagcttaagcacaaaagcc
ttgctggcggagattaaagagatcagtgagaagaagcggaaggaagatgacgttcttctc
tcaatcgctgctggaaatagacgacctattattcccaatttggaatttgagtaccctgat
cctgaaatccatgaagatctgtatcaactcatcaaatattcttgtggagaagtttgcact
accgagcaattggataaagttatgaagatatggacaaccttccttgaaccaatgcttggt
gttcctactcggcctcaaggtgcagaagatactgaagatgtagtgaaagcgaaaaatcat
actggcaaacatggtactgtgagtgcgggagacactgatggcagtcctggtggcggtgct
actgcaacgaattccaaacagttaaattcgtcaagaaatggagacgaaagcattcaacct
gaacagtcaagctcttgcaggacttgggcagtaaatggggctaatggggttaaagatgaa
agttcccttgacattgatcgtgctgcgtgtaaaggtgatactttctgcaatacctctcaa
caaggtaaagtgcagagtaatgcatctacagccgatgaagcgtctggagtgagcaaacaa
gacaattccaatgaaagattagtcaattctaatttatcaccccctgggttggagcaaagt
aatggaagaactaatcaagaaaactcatcagggcttagtcctactccatccagaccaggt
aatggcactgttgacggtgggcttgagttaccttcatcagagggtggtgattccacaaga
cctgttatatcctcaaatggagcaatcggagaaggcaccaaaggtctcagatatcttgaa
gagtctgctagacacttcaagattgaaagagaggaaggtgaaatatctccaaacggagat
tttgaggaggataattttgcaaattacagagaagctggtttgggggctgtccaaaaacca
aaggatggtgttgttggcaggcaatatcaagccagacatgcggaagaagaaatatgcggt
ggagagacagggggagaaaatgatgctgatgctgacgatgaaggtgaggaaagcgctcag
aggtcatcagaggatagtgaaaatgcttccgagaatggtgatgtttctggtagtgagtct
ggtgatggagaggaatgttctcgtgaagagcgtgaggaagatgtggacaatgatgagcat
gataccaaggcagagagtgaaggtgaagctgaagggatggctgatgcccatgatgttgaa
ggagacggaatatctttaccgctttcagaacgttttctcctgactgtgaagcctcttgca
aagcatgttcctccagctttacatgacaaggagaaggactctagggttttctatggaaat
gattcgttctatgtgctttttaggcttcaccaaacactatatgagagaatacaatcggca
aagactaattcatcatctgctgagaggaagtggcgggcttcaaatgatatgagcccttcg
gattcttatgctagattcatgaatgcactttacaatttgcttgacggttcttctgacaat
acaaaatttgaggatgattgtcgagccatcattgggacacaatcatatgttctattcaca
ttagacaagctgatctacaagcttgttaaacagctccaaacagtcgccagtgatgagatg
gacaataaacttgtccaactttatgcatttgaaaaatcaagaaagccaggaagatttgta
gatgtggtttatcacgaaaatgctcgagttcttcttcatgatgagaacatttatcgcatt
gaatgttcatccttaccaacccgggtgtctattcagcttatggattttgggcatgataag
cctgaaatgactgctgtttccatggaccctaatttttccgcttatctgcacaatgaattc
ctctcagttcttcctgacaaaaaagagaagtctgggatcttcttgaagaggaacaaatgt
gcgtatggtagtagtgatgaattgtctgctatctgtgaggccatggaaggacttaaagtc
accaatggtttggagtgtaagatagcttgccattcatcgaaggtctcatacgttttagat
acagaagacttcctgtttcggacaaaaaggaaaaggaaaactttgcatcgggacagttca
tgccaaaagctggccaggtcttccaatggttcgagtagagtagagcggtttcacctgttg
ctttctggctcatga
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