Prunus dulcis (almond): 117629077
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Entry
117629077 CDS
T07328
Name
(RefSeq) putative CCR4-associated factor 1 homolog 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117629077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117629077
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117629077
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117629077
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
117629077
NCBI-ProteinID:
XP_034217488
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All DBs
Position
1:16857121..16858323
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AA seq
351 aa
AA seq
DB search
MKSYKFLLFPSISFSISNPSLSLSLSLSVASLLSALYSVLAFCSLCSLLFVLTLLVMKIR
GVWAHNFHQELSQFDHCLHRFPVISFDTEFPGFLRDTPRDALEDQRYEDVKFNVESLKLL
QLGFTLSDAHGNIGGTWEFHLSGFNEKSDPHVVASISLLKRNGLDFARLGQFGISVAEFV
FGFLRVLRFHRGLHDLTWVCFHGLYDLAYLLKLLTQKPLPDSVVMFAKALGVVFGTIYDV
KFMARYCRGFFGGEIGLARVAKLLDVERSGEAHQAGSDSLLTAAVFSKMNATFRSVAGMS
QGCLYGISPTIVRYWQPAPVILRRPCFPVAAPRVYGARLIHSPILPTYVHM
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcctataaattccttctcttcccttcaatttcattttcaatttcaaacccatct
ctctctctctctctctctctctctgttgcttctctgctttctgctctctactctgtgctc
gctttctgctctttatgctctctgctctttgttctcacactgctagtcatgaagatcaga
ggagtttgggcccacaacttccatcaagaattgtctcaattcgatcactgcctgcaccgc
ttccccgtcatctctttcgataccgaatttccaggctttctccgagacactccccgagac
gcactcgaagatcaacgttacgaagatgtaaaattcaatgttgaatccctcaaattgctc
cagttgggattcactctgtccgacgcccatggcaacattgggggaacttgggaattccac
ttgtctgggtttaatgagaaatctgaccctcatgttgtcgcttccatttctctactcaaa
aggaacggtcttgattttgcgagacttgggcaatttgggatttctgttgcggagtttgtg
ttcgggtttctgcgtgtccttagattccacagagggttgcatgatttgacatgggtttgc
tttcatggcctgtatgacctggcctatttgctcaagctcttgacccaaaagcctctgccc
gattcagtggtgatgtttgctaaggctcttggtgtagtttttggcaccatttatgatgtc
aaattcatggctcgctactgccggggattctttggcggtgaaattggattggcaagggtg
gccaagcttcttgatgtggagcgttccggtgaagctcatcaagcgggttcggacagtttg
ttgactgccgctgtgttctccaagatgaacgcaacgtttaggtctgtggctgggatgtct
caaggctgcttgtatggaattagcccaacaatcgtgcgatattggcagcccgctcctgtg
atcctccgtcgcccttgctttcctgttgcagcacctcgtgtctacggtgctcgtctcatt
catagtcctattcttcccacttatgtacacatgtag
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