Prunus dulcis (almond): 117629374
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Entry
117629374 CDS
T07328
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117629374
03036 Chromosome and associated proteins [BR:
pdul03036
]
117629374
Enzymes [BR:
pdul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
117629374
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117629374
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
117629374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MOV-10_beta-barrel
AAA_11
Motif
Other DBs
NCBI-GeneID:
117629374
NCBI-ProteinID:
XP_034217829
LinkDB
All DBs
Position
1:5059882..5063395
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AA seq
706 aa
AA seq
DB search
MSIFLEVLKCLLCCEDEHENYHGSYNQIPRQTSFHHNDYEYRTPRRNYSPPLTSTNQSPA
LYNYKPPSPPPQAPKSPFSSSSSSPKPPTSSSKPQQSSSPSPNFPTSLSKTQPSSSFYPY
STFPEPPSSSSKPPQSTFVNPSSYKPLQSSVNASSFTREFLTIVFKSQESSSVDQPSALP
KPPTSSSKLPQSTLISTSSPSLQFQTPSSRPSPPKLSTASSKPPQASSKSHSSSPNPPTS
SKPSPSSGSLVSSTKLPPIFKQVLSPACPSVINQKVKKNYVWVEKDPLPIFLIPEDIKDL
IKNDIVPNVLNQPLSPATYKDYFAALLYAEEFYHEKWADFNMKNVTLKLHEAAVYKYLEK
EEKTFIEFEIDSVPEKRPFLLSRDIVYVRPSGTNVDQFQGIIYRIIRSSLVLVEFEDEFY
AHHDSTQKYDVSFSFNRVCLKRAHKAVQTASDALFKNFLFPDCVSRTSIPTAPALLSTHP
DKLSAVRRILSIRGSPPYLVAGSTTRGVVTEAVRQLCQTSPENKFLICAPSNRCCDEIMR
SLLKVIPETDMFRANAAFREKHEVPDDILPSCRYKETYFSCPPTEELRETYFSCPPTEEL
REFRVIFSTYISSFRLHDKGLTAGHFSHIFLVDASSAIEPETAVALTNFAEKSTTVIVTG
QPGDRSRWVRADMARERGLKISYFERLFKSRPYRSLNPMLITHLDQ
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatttttcttgaagtcttgaaatgccttctttgttgtgaagatgagcatgagaat
tatcatggttcttacaatcaaattcccagacaaaccagtttccatcataatgattatgaa
tatcgaactccccgtagaaactactcgccaccgctgacttctactaatcaatctccagcc
ttgtataactataaacccccatcacctccacctcaagcacctaaatctccttttagttct
tcttcatcatcccctaagcctccaacatcttcatcgaaaccgcagcaatcatcttctcca
tctcctaatttcccaacatctttatctaaaacacaaccatcttcttctttttatccatat
tcaacattccctgagcccccatcatcttcatctaagccgcctcaatcaacttttgttaat
ccatcttcatataaaccactacaatcctctgtcaatgcatcttcatttactcgtgaattc
ctaacaattgtatttaaatcacaagaatcttcttctgttgatcagccttcagcattacct
aaacccccaacatcttcatctaagctgccccaatccactcttattagtacatcttcacca
tcccttcaattccaaacaccttcatctagaccatctcctcctaaactgtctacagcctcc
tctaaaccacctcaggcttcatcaaaatcacattcatcatcaccaaatcctccaacatct
tcaaaaccatctccatcctcaggatcgctggtgtcttccactaagctccctccaatcttc
aagcaagttctatcccccgcctgcccgagtgtaataaatcaaaaggtgaagaaaaattat
gtgtgggtcgaaaaggatccattacctatatttctgattccggaggatatcaaagatttg
atcaagaatgacattgtgcccaatgttctaaaccagcccctgtctcccgcaacatataag
gattactttgccgctctgttatatgctgaagagttctaccatgagaaatgggcagatttc
aatatgaagaatgtgacactgaagttgcatgaagcagcagtttataaatatctagagaag
gaagagaaaaccttcatagaatttgagattgattctgttcctgaaaagaggccattcctt
ttgtcaagggatatagtctatgtacgaccatcgggtacgaatgttgaccaatttcagggc
attatataccgcattattaggagcagtcttgtattagtggaatttgaagatgaattttat
gctcatcatgattcaacccaaaaatatgatgtgagcttctcattcaatagagtctgtttg
aaaagagctcacaaagcagttcaaactgcatcagatgctttatttaagaacttcctcttt
cccgattgtgtttctcgtacgagcatccccactgcaccagcgctgctttctacccatccg
gataagttatctgcagttcgtcgtattttaagcattcggggctcaccgccttacctagta
gctggctcgacaactcgaggggttgttactgaagcagtacgccagttatgtcaaacctca
ccagagaataagtttcttatatgtgctcctagtaaccgctgttgtgatgagattatgaga
agcttgttgaaagtgattccagagacagatatgtttcgagccaatgctgcatttcgcgag
aaacatgaggtgcctgatgacatcctcccatcatgccgttacaaagagacttatttctct
tgtcctccaacagaggaactccgagagacttatttctcttgtcctccaacagaggaactc
cgagaatttagggtgattttctcgacttacataagtagctttcggctgcatgataaaggc
ctaaccgctggacattttagtcatatttttctggtggatgcttcatctgccattgagccg
gaaacagcagtggccttaactaattttgcagaaaaaagtactactgttatagtcactggt
caaccaggagatcgttcgcgttgggttcgcgcagacatggcaagggaaagggggctgaag
atttcatacttcgagagacttttcaagtcaaggccatatagaagcctcaatccaatgctt
atcacacatttggaccaatag
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