KEGG   Prunus dulcis (almond): 117629393
Entry
117629393         CDS       T07328                                 
Name
(RefSeq) protein RAE1-like isoform X1
  KO
K14298  mRNA export factor
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117629393
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdul03019]
    117629393
   03036 Chromosome and associated proteins [BR:pdul03036]
    117629393
Messenger RNA biogenesis [BR:pdul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     117629393
Chromosome and associated proteins [BR:pdul03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    117629393
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EML EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_2nd
Other DBs
NCBI-GeneID: 117629393
NCBI-ProteinID: XP_034217858
LinkDB
Position
5:complement(4972605..4978654)
AA seq 353 aa
MSKFMAAPNANANSTSNPNPNNSFEVAQPPNDSISSLSFSPKSNILVATSWDNQVRCWEI
QQSGTNLVSQPQAAISHDHPVLCSTWKEDGTTVFSGGCDKQVKMWPLGGQPVTVAVHDAP
IKEIAWIPEMSLLVTGSLDKTMKYWDVRQPNPVHTQQLPERCYALSVRYPLMVVGTADRN
LIVFNLQNPQTEFKRILSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDEKQNDKNFT
FKCHREGTRIYSVNSLNFHPVHHTLTTAGSDGSFTFWDKDSKQRLKEMSRCNQPIPCSTF
NNDGSIFAYAVCYDWGKGAEKHNPATAKNHIFLHVPQEAEVKRKPRVNTGGKR
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgtcgaagttcatggctgctccaaatgcaaatgcaaattcaacttcaaatccaaatcca
aacaactccttcgaggtcgctcaacctccaaacgactccatatcaagcctaagtttcagt
cccaagagcaacattctggtcgccacctcctgggacaaccaggtgcgatgctgggagata
caacagagcggaacaaatcttgtcagtcagccccaggcagcgatatcccatgaccatccg
gttttgtgctcaacttggaaagaggatggaacaactgtgttctctggaggttgcgacaag
caagtgaagatgtggcctttgggtggccagccagtaacggttgccgtgcatgatgcaccc
attaaagagattgcttggatccctgagatgagcctcttagtcacaggaagcttggacaag
actatgaagtattgggacgtgaggcagccaaatccggtgcatacacaacaactacctgag
cgctgttatgctctatcagtgagataccctctaatggttgttggcactgcagacagaaat
ctgattgtttttaacttgcagaaccctcagactgaattcaagagaattctttcgccccta
aagtatcaaacaaggtgtgtggctgcatttcctgatcagcaaggattcttggttggctct
attgaagggagggttggcgtgcatcatctggatgaaaaacaaaatgataaaaactttacc
tttaagtgccatagagagggcaccaggatatactcagtcaactctctgaacttccatcca
gtgcatcacacacttactactgctggttctgatggttctttcactttttgggataaggat
agcaaacagagactaaaggaaatgtcaaggtgcaatcaacctataccttgcagtacgttc
aacaatgatggttccatatttgcatatgcggtttgctatgattggggcaagggtgcagaa
aaacataatccagctaccgcaaagaaccacattttcctccatgtgccacaggaagccgag
gttaaaaggaaaccacgagtcaacactggtggaaaaaggtga

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