Prunus dulcis (almond): 117629798
Help
Entry
117629798 CDS
T07328
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117629798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117629798
03009 Ribosome biogenesis [BR:
pdul03009
]
117629798
04131 Membrane trafficking [BR:
pdul04131
]
117629798
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdul04147
]
117629798
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117629798
Ribosome biogenesis [BR:
pdul03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
117629798
Membrane trafficking [BR:
pdul04131
]
SNARE
SNARE associated proteins
Others
117629798
Autophagy
Aggrephagy
Other aggrephagy associated proteins
117629798
Exosome [BR:
pdul04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117629798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_33
CDC48_2
AAA_2
AAA_22
AAA_5
TIP49
NPHP3_N
AAA_14
RNA_helicase
nSTAND3
AAA_17
Mg_chelatase
AAA_28
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
ABC_tran
Vps4_C
AAA_7
NACHT
NB-ARC
TsaE
DUF815
AAA_24
Viral_helicase1
Zeta_toxin
AAA_lid_PRS2_C
KAP_NTPase
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
117629798
NCBI-ProteinID:
XP_034218300
LinkDB
All DBs
Position
6:complement(7791880..7797113)
Genome browser
AA seq
803 aa
AA seq
DB search
MAHPAESSDSKKKDFSTAILERKKSPNRLVVDEAINDDNSVVSMHPETMEKLQLFRGDTI
LIKGKKRKDTICIALADDTCEEPRIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHIL
PIDDSIEGVTGNLFDAFLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPGEYCVVA
PYTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPP
KGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAP
SIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDSALR
RFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERISKDTHGYVGADLAALCTEA
ALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSWED
IGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQAN
FISIKGPELLTMWFGESEANVREIFDKARASAPCVLFFDELDSIATQRGSSSGDAGGAAD
RVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRFQIFK
SCLRKSPVSKDVDLRALARFTQGFSGADITEICQRSCKYAIRENIEKDIERERRRGENPD
SMDEDIDDEVAEIKAAHFEESMKYARRSVSDADIRKYQTFAQTLQQSRGFGTEFRFADNQ
TGATGADPFATSAGGADEDDLYS
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggctcacccagccgaatcgtccgactcgaagaagaaggacttctcgaccgcgattttg
gagcggaagaagtcgccgaaccgtctcgtcgtggatgaggctataaacgatgacaactct
gtcgtttcgatgcatccagagaccatggaaaagctccagcttttccgtggcgacactatc
ctcatcaaggggaagaaacggaaggacacaatctgcattgcacttgctgatgacacctgt
gaagagccaagaatcaggatgaacaaggttgtcagatcgaatttgagggttcgacttgga
gatgttgtgtctgtacaccaatgccctgatgtgaagtatgggaaacgtgttcacattctg
cctattgatgactccatagaaggagttactggaaatctctttgatgcctttttgaaacct
tacttcttggaagcttatcgccctgtgaggaaaggagatctgttccttgtcagaggagga
atgagaagtgtagagttcaaggttattgaaacagacccaggagaatattgtgtggttgcc
ccatacaccgagatcttctgtgagggggaaccagtgaaaagggaggatgaggaaaggttg
gatgaagttggttatgatgatgtgggtggtgttcggaagcagatggctcaaatccgtgaa
ttagttgagctgccactgaggcatcctcaactgtttaaatctattggtgtgaaaccacca
aaaggaattctactttatggacccccaggttcaggaaagacattaatagccagagctgtt
gccaatgaaactggtgcttttttcttttgcattaatgggccagagattatgtctaaattg
gctggagagagtgagagcaatctcagaaaggcatttgaagaagcggagaagaatgcccca
tcaatcatctttattgatgagcttgattcaattgctcctaagagggagaagacacacggt
gaggttgaaaggcggattgtttctcaacttttgactctgatggacggattgaaatctaga
gctcacgttattgttattggtgctacaaatcgtccaaacagtattgactcggctttgaga
aggtttggtaggtttgatagggagatagacattggtgttcctgatgaagttgggcgtctt
gaagttcttcgcattcacaccaagaacatgaaactctccgatgatgttgatttagagagg
atttccaaagatacacatgggtatgttggtgctgaccttgctgctctctgcactgaagct
gcactccaatgcattagggagaagatggatgtgattgacttggaagatgaaaccattgat
gcagagatactcaactcaatggctgtaacaaatgagcacttccagactgctctaggaaca
agcaatccatctgctttgcgcgaaacggttgttgaagttcccaatgttagttgggaggat
attggaggccttgaaaatgtcaagcgggagctacaagagactgttcaatatcctgttgag
cacccagagaagtttgagaaatttggcatgtcaccttctaaaggggtccttttctatgga
cccccaggatgtgggaaaactcttttggccaaggcaatcgcaaatgaatgtcaagctaac
ttcattagtatcaaaggccctgaactactcaccatgtggtttggtgagagtgaagccaat
gttcgagaaatctttgacaaggctcgtgcatctgcaccatgtgtccttttctttgatgag
cttgattccattgctacacagagaggaagcagttctggggatgcagggggtgctgctgat
cgggttcttaaccaactcctgactgaaatggatggcatgacagcaaaaaagacggttttc
attattggggccacaaaccgacctgacatcattgacccagcacttctccgacctggccgt
cttgatcaattgatttatattcctcttcctgatgaagaatcgcgtttccaaatctttaaa
tcctgcttgagaaaatcacctgtctcaaaagatgttgatttgagagcattggccaggttt
acacagggctttagtggggctgatatcacagagatctgccagcggtcctgcaagtatgcc
ataagagaaaatattgagaaggatatagagcgggagaggaggagaggggagaatccggat
tctatggatgaggacatcgatgacgaagtggcagagattaaagctgctcattttgaggag
tcaatgaaatatgctcgtaggagtgtcagcgatgcagatattcgcaaatatcagaccttt
gctcagaccttgcagcagtccagaggtttcggaactgagtttaggtttgctgataaccaa
actggggcaactggtgctgatccattcgcaacttctgctggtggggctgacgaagatgat
ttgtatagttaa
DBGET
integrated database retrieval system
