Prunus dulcis (almond): 117629818
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Entry
117629818 CDS
T07328
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdul04131
]
117629818
Membrane trafficking [BR:
pdul04131
]
Protein recycling
Others
EARP complex
117629818
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
DUF5667
Motif
Other DBs
NCBI-GeneID:
117629818
NCBI-ProteinID:
XP_034218332
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Position
6:complement(8372500..8387810)
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AA seq
1123 aa
AA seq
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MQQNLFPFGSVLGNPFLFNGDLSEGLESPGVLFLVPFLLFQGGEMDLSKVGEKILSSVRS
ARSLGLLPSASDRPEVPARAAAAAAVARAIAGLPPHQRFGLSSSSQELSSIYGSTPQGPV
VEEIEEEFYEEDFDPVRHILEHIPSEENELTYFERRATLRLAQLDRVAERLSRNVMEHHE
VMVKGMHLVRELEKDLKVANVICMNGRRHLSSSRNEVSRDLIVNSNSKKKQALLDMLPVL
TELRHASEMQAELENLVEEGNYCKAFQVLSEYLQLLDSFSELSAVQEMSRGVEVWLGKTL
QKLDSLLLGVCQEFKEEGYITVVDAYALIGDISGLAEKIQSFFMQEVLSETHSILKNIVQ
EDKGVHMQNSRLTYSDLCLQIPEPKFRQCLLNTLAILFKLMCSYHEIMGFQLGNKDAASK
TSSMTHKESEISQTPGGVQQILSPCSSQKVNGSLLESVDIMHDSSYLEESTNTSSSVEST
GNTSSLCTSSGDLVDEARKDDSAASTSGSPWYQLRKDATAFVSQTLQRGRKNLWQLTTTR
VSVLLSSASVSSASIHQFLKNYEDLSVFILAGEAFCGFEATDFRQKLKAVCENYFVAFHR
QNIYALKMVLEKEIWLIMPPDTVQEITFPGLLGDGAPLIVPSDGNSTNARVLHSDKSTKL
VDTGVKKSGFSNWLRNGNPFLLKLTHTSKEGLKWNGAISGEIDGNFSERLGDKVSPRKSD
GSHSNGANSVLEEENEDLLADFIDEDSQLPSRISKPKLLRNQSSHYNDGDIIAQTGSSIC
LLRSMDKYARLMQKLEIVNVEFFKGICQLFEVFFHFVFETFAQQNSNSGGKGSPDPINYR
LKTALSRIQQDCDQWIRAPSSSPTSLNSAFAHTDITPMSPPSTNFGNTPGTSVGLKERCA
GADTISLVARMLHRSKAHLQTMLLQNNGAVVEDFYVHLVDAVPDLIEHIHRTTARQLLHI
NGYVDRIANAKWEVKELGLEHNGYVDLLLGEFKHYKTRLAHGGIRKEVQDLLLEYGLKIV
SQTLIEGLSRVKRCTDEGRALMSLDLQVLINGLQHFVSMNVKPHLQIVEAFIKAYYLPET
EYVHWARAHPEYTKNQIVGLVNLVASMKGWKRKTRLEVLEKIE
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagaatctgtttcccttcggcagcgttttgggaaatccgtttttgttcaatggc
gatttgagcgagggcttggagagtcctggggttttgttcttggtcccctttttgttgttc
caaggtggtgagatggatttgtctaaggtcggcgagaaaattctgagctccgttaggtct
gccagatcgcttggccttcttccttctgcttctgatcgccccgaggttcctgcgcgagct
gcggctgctgcagctgttgctcgtgctattgccggactgcctccacaccaaaggtttggt
ctctcatcaagctctcaagaactgagctcaatatatggaagcacaccgcaaggtccagta
gtggaggagatagaggaagaattttatgaagaggattttgatccagttagacatattctg
gagcatattccatctgaagaaaatgaactgacttattttgagagacgggccactcttaga
ttagcacaactggatagagtagcagaacgtttatcccgcaatgttatggaacatcacgaa
gttatggtgaaggggatgcatttagtcagggaattggagaaagacttgaaagttgcaaat
gtcatctgcatgaatggacgacgtcatcttagctcatcaaggaatgaggtttctagggat
ctcatcgtgaattccaattccaaaaagaaacaagctcttctggacatgcttcctgtgtta
actgagcttcgtcatgcatcggaaatgcaagcagaacttgagaatcttgttgaggaagga
aattactgcaaggcctttcaagtcctgtctgagtatttacagctgttagatagtttttca
gaactttctgcagtacaagagatgagtcgtggtgtagaggtttggctgggaaaaactctt
caaaagctggattcattgttgctaggagtgtgccaggagttcaaagaggagggctatata
actgtggttgatgcttatgcactaattggggatatctctggtcttgctgagaagatacaa
agtttctttatgcaggaagttctctcagaaacccactctatattgaagaatattgtgcaa
gaggataagggagttcacatgcaaaatagtcgacttacctacagtgatctatgccttcag
atacctgagcctaagtttaggcagtgtttgttaaatacgctagctatcctattcaagttg
atgtgttcatatcatgaaatcatgggatttcagctgggtaataaggatgcagcaagtaaa
acttcaagcatgacgcataaggaaagtgaaatctctcagactccaggaggggttcagcaa
attttgtctccttgctcttcccaaaaagttaatggctctctcttggaatctgtagatata
atgcacgattcatcttatttagaggaatctacaaataccagctcttcagtcgagtctact
ggaaacacatcttcgctgtgtactagttctggcgatttagttgatgaggctaggaaggat
gacagtgcagcatcaacaagtggatccccatggtaccaactgcggaaagatgccacagca
tttgtttcacaaacccttcagaggggacgcaaaaatctctggcaacttacaactactcgt
gtatcagtcttgctttcttctgcttcagtttcttctgctagcatacaccaattcttgaaa
aactatgaagatctgagtgtcttcatcttggctggagaagcgttttgcggatttgaagcg
actgacttcaggcagaagttaaaggcagtttgtgaaaattattttgtagcttttcatcgg
cagaatatatatgcgcttaaaatggtgttggaaaaagaaatttggttgataatgccaccg
gatacggtacaagaaattacatttcctgggcttcttggtgatggagcacctctaattgtt
ccatctgatggtaactctactaatgccagggttctacattctgacaagtctaccaaactg
gttgatactggtgtgaagaaaagcgggttctctaattggcttagaaatggaaacccattt
ttgctaaagctgacacatacttccaaagaaggtcttaaatggaatggtgccatttctggt
gaaattgatggaaattttagtgaaaggcttggtgataaggtctctccacgaaagagtgat
ggaagtcattcaaatggtgctaattctgttctggaagaagaaaatgaagatcttcttgca
gactttattgatgaggatagtcaactcccaagtcgaatttccaaacccaaactcctgaga
aatcaatcctcacattataatgatggagatataatagcccaaactggatcatctatttgt
cttctaaggtcaatggataaatatgccaggcttatgcagaaattagaaatagttaacgtt
gagttcttcaaggggatatgccagttgtttgaggttttttttcattttgtatttgaaaca
tttgctcagcaaaacagcaattcaggtggaaaaggctcacctgaccctattaattatcgg
ctgaagacagcattgtccagaatacaacaggactgtgaccagtggataagggccccatca
tcttcacccacatctttgaattcagcatttgcacacacagacataacacctatgagtcct
cccagtacaaactttggtaacacaccaggaacatccgtcggtctcaaggaaagatgcgca
ggtgctgacaccatctcacttgttgctcgaatgttgcatagatccaaggctcatctccag
acaatgcttcttcagaataatggtgctgtagttgaagacttctatgtgcatctggtagat
gctgtaccggatcttatagagcacattcataggacaacagcaagacaactgctccatatt
aatggttatgttgatcggattgccaatgcaaaatgggaagtaaaagagcttggactggag
cataatgggtatgttgacttgttgttgggagaatttaagcactataaaacaaggcttgct
catgggggaattcgcaaggaggttcaagatctcctcttagaatatgggcttaaaattgtt
tcccagactctcattgaaggcctctcacgtgtcaagaggtgtacggatgaagggcgggct
ctcatgtcattagatcttcaggttttgatcaatggcctccaacattttgtctccatgaac
gtgaagccccacttacaaattgttgaagcgttcatcaaggcatactatcttccagaaacg
gaatatgtgcactgggcacgtgctcacccggaatacacaaaaaatcaaattgttgggttg
gtcaaccttgttgcctctatgaaaggttggaagagaaaaaccagattggaagtgctggaa
aagattgaatga
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