Prunus dulcis (almond): 117629834
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Entry
117629834 CDS
T07328
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117629834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117629834
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117629834
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
117629834
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Motif
Pfam:
EXOSC1
ECR1_N
ECR1_N_2
RRP4_S1
CHASE5
Motif
Other DBs
NCBI-GeneID:
117629834
NCBI-ProteinID:
XP_034218354
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Position
6:28853396..28855530
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AA seq
195 aa
AA seq
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MGEDSEWVTPGEVLGKASKFKAGRGAYVSPDNLTVYASLTGLRRILSPRPDSPDQRPTVE
VTGHKAHGAIPEPGSIVIARVTKVMARMASADIMCLGTKSVREKFTGIIRLQDVRATEID
KVDMHMSFHPGDIVRAVVLSLGDARAYYLSTAKNELGVISAQSAAGATMVPISWTEMQCP
LTGQIEHRKVAKVGG
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagatagtgagtgggtgaccccaggggaagtgcttgggaaagcctccaagttt
aaagcaggcagaggtgcctatgtgtcgcctgacaatctcaccgtctatgcttccctcact
ggactccgccgcatcctatccccccgtcccgactcacccgaccagagacccactgtggaa
gtaactggtcacaaggcccatggtgccattccagagcctggatcaattgtcattgctaga
gttaccaaagttatggcaagaatggcttctgctgatattatgtgtcttggcactaagtct
gtccgtgaaaaatttaccggtataatcaggcttcaagatgttcgagcaaccgagatcgac
aaagtggatatgcacatgtcttttcaccctggtgacattgtcagagctgttgtgctgtcc
cttggagacgccagggcttattatctgtcaactgcaaagaacgaattaggtgttatttct
gcccagagtgcagcaggtgcaacaatggtgccaataagctggacagagatgcaatgccct
cttacagggcaaattgagcacagaaaggttgctaaggtcggaggatga
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