KEGG   Prunus dulcis (almond): 117629834
Entry
117629834         CDS       T07328                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117629834
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdul03019]
    117629834
Messenger RNA biogenesis [BR:pdul03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     117629834
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     117629834
SSDB
Motif
Pfam: EXOSC1 ECR1_N ECR1_N_2 RRP4_S1 CHASE5
Other DBs
NCBI-GeneID: 117629834
NCBI-ProteinID: XP_034218354
LinkDB
Position
6:28853396..28855530
AA seq 195 aa
MGEDSEWVTPGEVLGKASKFKAGRGAYVSPDNLTVYASLTGLRRILSPRPDSPDQRPTVE
VTGHKAHGAIPEPGSIVIARVTKVMARMASADIMCLGTKSVREKFTGIIRLQDVRATEID
KVDMHMSFHPGDIVRAVVLSLGDARAYYLSTAKNELGVISAQSAAGATMVPISWTEMQCP
LTGQIEHRKVAKVGG
NT seq 588 nt   +upstreamnt  +downstreamnt
atgggagaagatagtgagtgggtgaccccaggggaagtgcttgggaaagcctccaagttt
aaagcaggcagaggtgcctatgtgtcgcctgacaatctcaccgtctatgcttccctcact
ggactccgccgcatcctatccccccgtcccgactcacccgaccagagacccactgtggaa
gtaactggtcacaaggcccatggtgccattccagagcctggatcaattgtcattgctaga
gttaccaaagttatggcaagaatggcttctgctgatattatgtgtcttggcactaagtct
gtccgtgaaaaatttaccggtataatcaggcttcaagatgttcgagcaaccgagatcgac
aaagtggatatgcacatgtcttttcaccctggtgacattgtcagagctgttgtgctgtcc
cttggagacgccagggcttattatctgtcaactgcaaagaacgaattaggtgttatttct
gcccagagtgcagcaggtgcaacaatggtgccaataagctggacagagatgcaatgccct
cttacagggcaaattgagcacagaaaggttgctaaggtcggaggatga

DBGET integrated database retrieval system