Entry |
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Name |
(RefSeq) phytochrome B isoform X1
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KO |
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Organism |
pdul Prunus dulcis (almond)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:pdul00001]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
117629932
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
1:complement(9612292..9618089)
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AA seq |
1119 aa
MASGAQSSGTGHAKAHNNTESVSKAIAQYTVDARLHAVFEQSGESGKSFDYSQSMRTTKD
SVPEQQITAYLSRIQRGGHIQPFGCMMAVDEATFGVIAYSENARDLLDLTPQSVPILEKP
EILTIGTDVRTLFTPSSAVLLEKAFGAREITLLNPIWIHSKISGKPFYAILHRIDVGVVI
DLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKILCDTAVESVRELTGYDRVM
VYKFHEDEHGEVVAESKRPDLEPYLGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVHV
IQDEGLMQPLCLVGSTLRAPHGCHSQYMANMGSIASLALAVIINGNDEEAIGGRNSMRLW
GLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQLSEKHVLRTQTLLCDMLLR
DTPAGIVTQSPSIMDLVKCDGAALYYRGKYYPLGVTPTEAQIKDIVEWLLAFHGSSTGLS
TDSLGDAGYPGAASLGDAVCGMAAAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQ
RMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQIILRDSFKDAETNNSKAVTQAQLGDL
EFQGINELSSVAREMVRLIETATAPIFAVDVDGCINGWNAKVAELTGLSVEEATGKSLVH
DLVYKESEEIVGRLLFRALRGEEDKNVEIKMRTFGPEHDNKPVFVVVNACCSKDYASNIV
GVCFVGQDVTGQKVVMDKFIKIQGDYKAIVHSPNPLIPPIFASDDNTCCSEWNTAMAKLT
GWSHGEILGKMLVGEVFGSCCRLKGPDAMTEFMIVLHNAIGGLDTDKFPFSFFDRNGKYV
QALLTANKRVNAEGQVIGAFCFLQIASSELQQALKVQRQQENESFSRMKELAYICQEIKN
PLSGIRFTNSLLEATDLNEDQKQFLETSAACEKQILKIIKDVDLDSIEDGSLELEKSEFF
LGSVINAVVSQVMLLLRERDLQLIRDIPEEIKTLAVCGDQVRIQQVLADFLLNMVRYAPS
PEGWVEIHVLPSLKKVPDGVTLVRTEFRLVCPGDGLPPQLVQDMFHSSQWMTQEGLGLSM
CRKILKLMNGEVQYIRESERCYFLIILEFPMPRSTKSID |
NT seq |
3360 nt +upstreamnt +downstreamnt
atggcttcaggtgctcagtcgtcgggcacaggccatgccaaagctcacaacaatacagag
tctgtaagcaaagccattgctcagtacaccgtcgatgctcggctgcacgcggtgtttgag
cagtcaggcgagtctggtaagtccttcgactactcacagagcatgaggaccaccaaagac
tcagtcccggagcagcagattacagcctacctgtccagaattcaaaggggtggccatatt
caaccctttgggtgcatgatggctgtggacgaagccacctttggggtcattgcgtacagc
gaaaacgcccgagacctgctcgacctaacgccgcagtcagttccgatcctcgaaaaacct
gagatcctcacaattgggactgatgtccgtacactcttcacgccctccagcgcagttttg
ctcgagaaagcatttggggctcgggagattacacttttgaacccaatttggatccactcc
aagatttctggaaagcccttttacgcaattctgcatcggattgatgttggggttgtgatt
gatttggagcctgctagaacagaggaccctgcgctgtctatagccggcgcggttcagtct
cagaaattggcagtgagggcaatttcacagctgcagtcactgcctggtggggacattaag
attttgtgtgatactgcggttgagagtgtaagggagcttactggttatgatagagttatg
gtgtataagtttcatgaggatgagcatggtgaggttgtggctgagagcaagaggcctgac
ttagagccatatcttgggctgcactatcctgccacggatatacctcaggcgtcgaggttt
ttgttcaagcagaaccgggtcagaatgatagtagactgtcatgccacgccggtccatgta
attcaggatgaagggctgatgcagcctctgtgcttggttggatccacacttcgtgcccct
catggttgtcactcccagtatatggctaatatgggctccattgcctcgctagctttggca
gtcatcatcaatggaaatgatgaggaagctattggcgggaggaactcaatgagactatgg
ggcctggttgtttgccaccatacctctgctcggtgcattccgtttccccttcggtatgct
tgtgagttcctaatgcaggcctttgggcttcagttgaatatggaattgcaattggcttca
caattgtctgagaaacatgttttgaggacccagactctcttgtgtgatatgcttcttcgt
gacaccccagctggcattgttactcaaagtcctagtattatggaccttgtgaagtgtgac
ggggctgcactatactaccgagggaagtactacccactaggtgtgaccccaactgaagcg
cagataaaggacattgtggagtggctgttggctttccatggaagttcaacaggtttaagc
acagatagtttgggtgatgctgggtaccctggagctgcctctctgggcgatgctgtttgt
gggatggctgctgcttatatcactaagagggattttctgttctggttccgatcccacact
gcaaaagagatcaaatggggtggagcaaagcatcatccagaggacaaggatgatggacag
aggatgcatccacgctcttcattcaaggcatttttggaagtggttaaaagccgtagtttg
ccgtgggagaacgcagaaatggatgcaatacactctttgcagattattttgagagactca
tttaaggatgcagagacaaacaattcaaaagctgttacgcaggcccagcttggtgatctg
gagtttcaagggatcaatgagctcagctcggtagcaagagaaatggttagattgatagag
actgcaactgctcccatatttgctgtagatgttgatggatgtataaatgggtggaatgca
aaggttgcagagttgacaggtctctcagtcgaggaagctaccgggaagtccttggttcat
gatcttgtttacaaagaatctgaagaaattgttggcagacttcttttccgcgctttaaga
ggagaagaagataagaatgtagaaataaaaatgaggacatttggcccagagcacgacaac
aagcctgtttttgtggtggttaatgcttgctgtagcaaggattacgctagtaatatagtt
ggagtttgcttcgttggtcaggacgtaactggtcaaaaagtagtaatggacaagttcata
aaaatacaaggtgattacaaggccatcgttcatagtccaaaccctttgatccctcctata
tttgcttcagatgataacacatgttgctcggaatggaacactgccatggcaaagctcact
gggtggagccatggagaaatccttggaaaaatgttggttggagaggtcttcggcagttgc
tgtcgactcaagggtccagatgctatgacagaattcatgattgtcctacacaatgccatt
ggagggctagacacagacaaatttcccttttcattctttgaccgaaatgggaaatatgta
caagctctcttgacagccaataagagggtgaacgcagaaggtcaggttattggagctttc
tgctttttgcagattgcaagttcagaactgcaacaagctcttaaagttcagaggcaacag
gaaaatgaaagtttttctaggatgaaagaattggcttacatttgccaggaaataaaaaat
cctttaagtggtatacgctttaccaactcacttttggaggctacagacttaaatgaagat
caaaagcagtttttggagactagtgctgcttgtgagaagcaaattttgaagattataaaa
gatgttgatctggatagcattgaagatggatcactggagcttgagaagtcagaattcttt
cttgggagtgtcataaacgctgttgttagccaagtaatgttattgctgagggaaagggat
ctacaattgattcgggatattcctgaagaaatcaaaacattggctgtttgtggtgatcaa
gtgagaattcagcaggtcttagctgatttcttattgaatatggtacgttatgcaccatct
ccagaaggttgggtggagattcatgttcttccaagcttgaagaaagtacctgatggagtc
actctggttcgtactgaattcaggttggtatgtcctggtgatggtcttcctcctcaatta
gttcaagatatgttccatagcagtcaatggatgactcaggagggcctaggactgagcatg
tgcaggaagattttaaagctcatgaatggagaagtccaatatatcagagagtcagaaaga
tgttatttcttaattattcttgagtttcctatgcctcggagtacaaagagtattgactag |