KEGG   Prunus dulcis (almond): 117630041
Entry
117630041         CDS       T07328                                 
Name
(RefSeq) enhancer of mRNA-decapping protein 4
  KO
K12616  enhancer of mRNA-decapping protein 4
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    117630041
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdul03019]
    117630041
Messenger RNA biogenesis [BR:pdul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     117630041
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     117630041
SSDB
Motif
Pfam: Ge1_WD40 EDC4_C WD40_WDHD1_1st WD40 WD40_CDC20-Fz PEP5_VPS11_N WD40_Prp19 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR75_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_EML_2 HAM1_C
Other DBs
NCBI-GeneID: 117630041
NCBI-ProteinID: XP_034218649
LinkDB
Position
6:2277160..2284868
AA seq 1425 aa
MASSGNPNPPPQQQPQPFDMQKFFKPTNPTPLSPQSQTQNNSNQNPNPNLSSSSFPIPPA
SFPPPSGPYSYPPQTAPFHHHQFQYHPHPQAHPHSNHPQIPYSPQDHHLLHQRSLSFPTP
PLQPPSTYNIATAPSNPSNNNSSTSNSNPNSGARIMALLGAPSGNLELSAALPELSVPPG
VSIVPTIPMGIPPTGPTRMPSNKLPKGRHLIGDNVVYDVDVRLQGEFQPQLEVTPITKYG
SDPQLVLGRQIAVNKSYICYGLKQGNIRVLNIHTALRSLFRAHTQRVTDMAFFAEDVHLL
ASVSVEGRLFVWKISEGPDEEGTPQITGKVVIAIQIVGEGEAVHPRVCWHCHKQEVLVVG
FGKRVLRIDTTKVVKGEVPSADEPLKCPVEKLIDGVQFVGKHDGEVTDLSMCQWMTTRLV
SASMDGTIKIWEDRKAQPLLVLRPYDGHPVYSSTFVTAPHQPDHIILITVGPLNREVKIW
SSASEEGWLLPSDAESWKCTQTLELKSSAEPRVEEAFFNQVIALSQAGLLLLANAKKNAI
YAVHLEFGPDPAATRMDYIAEFTVTMPILSFTGTSISPHGEQIVQVYCVQTLAIQQYALE
LSKCLPPPLDNVGLEKSDSNISREPSGAEGFALDLSGSKPTEMLLANSNSALKQTIQDSS
SEGAVSVRYPVSSSSVEATTSKDITTSSTESRPVAMASATSDSDVVFVASPPIPLSPRLS
RKLSGLRSPTDGSEPGRTLNEHGGDQQVNDYSVDRQLDSVRSNLSDVPAVDDDSRNIEQK
VGQDDLSSVLNPPIMFKHPTHLITPSEILMAASSSEGTNPIDSKNEGEANIQDVIVNSDM
GNAEVEVKVVGEARSTQNDEFGSQGEPQNVVSENKEKFFCSQASDLGIEMARECCAISAE
TYTTDEARQGDDSSMTEPLAQSNAGDEDQESAKDVSGPCTTPPVFQSHTQTTKVKKQKWK
NSQASGQSSPSPSVLNSIDSNNEPGGSSSPPSAEAAFPQIMAMQDTINQLLTMQKELQKQ
MTMMVAVPVTKEGRRLEAALGRSMEKAVKANNDALWARFQEENAKNEKLLRDRNQQITSL
INNFMNKDFPVMLEKMVKKELAVIGPAVARAITPAIEKAIPPAISDSFQRGVGDKAVNQL
EKSVNSKLEATVSRQIQAQFQTSGKQALQDALKSSMEASVVPAFEKSCKAMFEQVDATFQ
KGMLEHTNAAQQHFDSAHSPLALALREAISSASSVTQTLSGEVADGQRKLIALAAARTSS
SAVNPLVTQLTNGPLGGLHEKVEVPLDPTKELSRLVSERKYEEAFTGALQRSDVTIVSWL
CSQVDLHGVLLLNPLPLSQGVLLSLLQQLACDISNDTSRKVAWMTDVAAAINPVNQMIAV
HVRPVFEQVYQILHHQHSLPTISSAELASIRLLMHVINSMLMACK
NT seq 4278 nt   +upstreamnt  +downstreamnt
atggcttcttctgggaatccaaatccaccgccccagcagcaaccccaaccctttgacatg
cagaaattctttaaacccacaaacccaacgccactctcgccccaatcccaaacccagaac
aattcaaaccaaaaccctaaccctaatttgagttcctcttcgttcccaatcccacccgcc
tctttccccccgccctctggcccttactcgtaccctccccagacggcaccgtttcaccac
caccaattccaataccaccctcaccctcaggcccacccccacagtaaccatccccaaatc
ccttactctcctcaagaccaccacttgctccaccagaggtctctctcatttcccacgcca
cccctccaacccccctctacttacaacattgccacggccccttccaaccctagcaacaac
aacagtagcacctccaattcgaaccccaattcgggtgctcgaatcatggcgcttctcggc
gctccatctggcaatctagagttgtcggctgctctgcccgagttatccgtccccccaggg
gtctcgatcgtgcccactatccctatggggattccacccactggccccactcgaatgccg
agcaataagctccctaaaggcaggcatttgattggtgataatgtggtttacgatgtggat
gttaggttgcagggtgagtttcagccacagcttgaagttacgccgattaccaagtatggt
tcggatcctcagcttgtgctgggccgccaaattgctgttaataagtcgtacatatgctat
ggattgaagcagggaaacattcgggttttgaatatacacactgcattgagatctttgttt
cgagctcatacacagagggtcacagacatggctttctttgctgaggatgttcaccttttg
gctagtgtgagtgtagaaggacggctttttgtatggaagatttctgaaggtccagatgaa
gaaggtacaccacaaatcacaggaaaggttgttattgccattcaaatagttggagagggg
gaagctgttcatccacgagtttgttggcactgccataaacaagaggttttggtagttggg
tttggaaagcgtgtattaagaattgatactactaaagtcgtgaagggtgaagtcccttct
gcagatgagcctctcaagtgtcctgttgaaaagctgattgatggagtccaatttgttggt
aaacatgatggagaagtgactgatttgtcaatgtgccaatggatgaccactcgtctggtt
tctgcttctatggatggaacaataaagatatgggaagatcgcaaggcacaaccactttta
gtattgagaccctatgacggccatcctgtttattcatctacatttgtgacagctccccac
cagccagatcatattatacttatcacagtggggccacttaatcgggaagtgaagatctgg
tcctcggcgagtgaagaaggctggctacttcccagtgatgctgaatcatggaaatgtact
cagacattagagttgaagagttctgctgaaccccgggttgaggaggcattctttaatcaa
gtcatagctttgtcacaggctggccttctcttacttgcaaatgctaagaagaatgctatt
tatgctgtgcacttagaatttggtcctgatccagcagcaacgcgcatggattatattgca
gaatttactgttaccatgcctattttgagttttaccgggacaagtatttcacctcatggt
gaacagattgtccaggtttattgtgtccagacactagccattcagcagtatgctctggaa
ttatccaagtgcttgcctccacctctggataatgtgggtttagaaaagtcagattccaat
atttcacgtgaaccatcaggggctgaaggatttgctttggatctatctggaagtaaaccc
acagagatgctgctagctaattcaaattcggcacttaaacaaaccatacaagatagtagt
tctgagggtgcagtttccgtgaggtatcctgtaagctctagttctgttgaggcaaccact
tcgaaagatattaccacttcaagtacagaatcaagacctgttgcaatggcatcagctact
agtgattcagatgttgtttttgttgcatcaccgcctattcccttgagtcctaggttgtct
aggaaactttctggtttaagaagtccaacagatggctctgaaccgggtcgcacactcaat
gagcatggtggagaccaacaagtcaatgattactcagttgacaggcaattggacagtgtt
cgttcaaacttgtcagatgtgcctgcagtggatgatgattcaagaaatattgagcagaaa
gttggacaagatgatttatctagtgtgctcaatcctcctatcatgttcaaacatccaacc
catcttataactccctctgagattttaatggctgcttcatcttctgaaggtactaatcct
attgacagcaagaatgaaggggaggcaaatatccaagatgtgattgttaacagtgatatg
ggtaatgctgaggtggaggttaaagtagtgggtgaagcaagatctactcaaaatgatgaa
tttggatctcaaggagaacctcaaaatgttgtttcagaaaacaaggaaaaattcttttgc
tcccaggcatcagatcttggaattgagatggcccgagaatgctgtgcaatatcagccgaa
acatatactacagatgaagctcggcaaggtgatgattccagcatgacagaaccactggcc
cagtctaatgctggagacgaagaccaggaatctgcaaaagatgtatctgggccatgtacc
accccaccagtttttcaatcgcatacacaaactacaaaagtgaaaaaacagaagtggaaa
aactctcaagcatcaggtcaatcttccccatcaccaagtgtgctcaattcaatagattcc
aacaatgaaccaggagggagttcaagccccccctctgcagaagctgcatttcctcaaatt
atggccatgcaggatacgattaatcagctactgactatgcagaaagaactgcaaaagcag
atgacaatgatggttgcagtcccagttacaaaggaggggagaagattagaggcggctctt
gggcggagtatggagaaggctgtaaaggccaataatgatgctttatgggctcgttttcaa
gaagagaatgcaaagaatgagaaattattgcgagaccgtaatcagcaaataactagcttg
atcaataacttcatgaacaaggactttccagtcatgttagagaaaatggtgaagaaggaa
ttggcggttattggaccagctgttgctcgtgctataactccagctattgagaaagcaata
cctccagctatttctgattccttccagagaggagttggtgataaggccgttaatcaattg
gaaaaatcggttaactcaaaacttgaagcaactgtttccaggcaaatccaggcgcagttc
caaacttctggcaaacaagctcttcaggatgctcttaagtctagtatggaagcttcagtg
gtacctgcatttgagaagtcatgtaaggccatgtttgagcaagtagatgctacgttccag
aaaggaatgttagaacatacaaatgcggcacaacaacactttgattctgcacattcgcca
ctggcacttgctttaagggaagctattagttctgcatcatcggtgactcaaaccttaagc
ggcgaagtggctgatggtcaacgtaagctaatagctcttgcagctgcacgaacaagctca
agtgcagtaaatcccctggtcacacaactaaccaatggacctttgggtggtctccatgag
aaggttgaggtgcctttggatccaacaaaggagctgtctaggttggtttctgaacggaag
tatgaggaggctttcactggagctctacaaagaagtgatgtgaccatcgtatcgtggttg
tgctctcaggttgatctgcatggggtattgttgctgaatcctcttcctcttagccaaggg
gtgcttctctctcttttgcaacagctggcctgtgatatcagcaatgatacatcgagaaaa
gttgcgtggatgacagatgtggcggctgccataaacccagtaaaccaaatgattgcagtg
catgtgcggcccgtctttgagcaagtttatcagatactgcaccatcaacatagcttgcct
acaatctctagtgccgagctcgcaagtattagacttctgatgcatgttatcaactccatg
ctgatggcctgtaaatga

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