Prunus dulcis (almond): 117630317
Help
Entry
117630317 CDS
T07328
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul00040
Pentose and glucuronate interconversions
pdul01100
Metabolic pathways
Module
pdul_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117630317
Enzymes [BR:
pdul01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
117630317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
PITH
Beta_helix
Motif
Other DBs
NCBI-GeneID:
117630317
NCBI-ProteinID:
XP_034218947
LinkDB
All DBs
Position
6:complement(13608276..13610482)
Genome browser
AA seq
467 aa
AA seq
DB search
MKVPLTATVLVLTIWLVASPNSSCSARRVVPDDFDLFDYGAVHHNTPTDDEGFSQEAFRE
GWETESTTRDSFNRGNAQTEEYDPQAFLEAWEAKTNTFNVVDYGAVGNGLVDDTKAFLKA
WGAMCASSTQGTLTLVVPKGKRFLLNAVAFEGPCRASKVNFQIQGSIVAPNNIGAWTNKE
MWIHFSDVQGLTVNGGGRIDGNGAVWWKACGSKGCQRPTALHFNKCHGFQLSRLAIFNSP
KNHISICSCNGPRVLGLLIWAPKDSPNTDGIDISRSTRVTIQSSHIATGDDCIAINSGSS
YIKIRDIRCGPGHGISIGSLGEHGEYSQVEEVQVSNCSFKGTTNGVRIKTWEGGSGYARK
ITFEGITFEDTKNPIIIDQHYFDKRPTSATDTSKSVQVSDITYRNINGTCTDEKAITLAC
AGGGCTNIVMNNVNIKSDLPNKRSYAYCDNAHGTSAFSLPSVPCLLH
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcccgcttactgccaccgttttggtcctaactatttggctagttgcttcacct
aatagttcatgtagtgctagaagagtcgtgccagatgatttcgatttgtttgattatggt
gctgttcatcacaacaccccaactgatgatgagggtttttctcaagaggccttccgagaa
ggatgggagactgaatcaacaacaagagactcattcaatcgtgggaatgcccaaactgaa
gaatatgatccacaagccttcctggaagcatgggaagcaaaaacaaatactttcaatgtg
gtagattacggtgctgttgggaatggcctagtagatgatacaaaggccttcctcaaggca
tggggagctatgtgtgcttcatcaactcaaggcacccttaccctggtggtaccaaagggc
aaaagattcttgttaaatgctgtggcgtttgaagggccttgcagggctagtaaagtaaat
ttccagatacaagggagtattgttgcaccgaataacattggtgcatggacaaacaaggag
atgtggattcatttttcggatgtacaaggtctaacggtcaatggaggaggtcgaattgac
ggaaacggcgctgtttggtggaaagcttgcggtagcaagggctgtcagagaccaactgct
ctccatttcaacaaatgtcatggcttccaattgagtcgtctggcaatttttaatagccct
aaaaatcatataagcatttgtagctgcaatggccctcgagttctcggtctcttaatttgg
gctcctaaagacagtccaaacacagatggaattgatatttcccgatcaacccgagtcaca
attcaatcttctcacatagcaactggtgatgattgtattgccatcaatagcggttcgtct
tatatcaagattagggatattagatgcggaccaggccatggtattagtattggaagtcta
ggtgaacatggagaatacagtcaagtggaagaggtgcaagtgagcaattgcagcttcaag
gggacaacaaatggagtgagaatcaagacatgggaaggcggatcgggatatgctaggaag
atcactttcgaaggcatcacatttgaagacaccaaaaatcctatcataatagaccagcac
tatttcgataaacgacctacttcagcaacggacacaagcaagtcggtacaagttagcgac
atcacataccgaaacataaacggaacttgcactgatgagaaagccataactttggcctgc
gcagggggcggatgcacaaacattgtgatgaacaacgtgaacataaaatctgatcttcca
aacaagaggtcttatgcttactgcgacaatgcccatggcacctctgccttctctttgcct
tctgtcccatgccttttgcattga
DBGET
integrated database retrieval system
