Prunus dulcis (almond): 117630691
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Entry
117630691 CDS
T07328
Name
(RefSeq) structural maintenance of chromosomes protein 3 isoform X1
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdul03036
]
117630691
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pdul00535
]
117630691
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
117630691
Meiosis-specific proteins
Cohesin complex and associated proteins
117630691
Proteoglycans [BR:
pdul00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
117630691
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
Myosin_tail_1
Microp_apicomplexa_7
Cytochrom_C_2
Motif
Other DBs
NCBI-GeneID:
117630691
NCBI-ProteinID:
XP_034219300
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Position
6:12812800..12829008
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AA seq
1204 aa
AA seq
DB search
MYIKQVIIEGFKSYREQVATEAFSPKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED
RHALLHEGAGHQVLSAFVEIVFDNADNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRRQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKSLEYTIYDKELQDARQKLA
EVEDARNKVSETSTKMYNSVLDAHEKSKDLDKIMKDLTKELQALSKEKEAIEKQRTEAIK
KHTELELDVKDLQEKISGNFGAKGDAVRQLQTLQKEIQDSMDELEKMNPLYEDQVMKEKE
ITKGIMEREKQLSILYQKQGRATQFSSKAARDKWLQKEIDDLERVLSSNLAQEQKLQDEI
KRLNTELSERDAYIESRRREIATIESLISQSHAGFNHHKSQRDKLQDERKSLWRNETELS
AEIEKLRTEVEKAEKSLDHATPGDVRRGLNSVRKICREYKIPGVFGPIIELLDCDEKFFT
AVEVTAGNSLFHVVVENDEISTQIIRHLNSLKGGRVTFIPLNRVKAPRVIYPQNSDVVPL
LKKLKFAPNYNPAFAQVFARTVVCRDLDVATKVARTDGLDCITLEGDQVSKKGGMTGGFY
DHRRSKLKFMCTIIQNTKSINMKEEELEKIRFMLQEIDQKITDLVTEQQKIDAKRAHDKS
ELEQLKQDIANADKQKILISKALGNKEKSLADVRSQIDQLRASMAMKRAEMGTDLIDHLT
PVEKDLLSRLNPEIADLKEKLILCKTDRIETESRKAELETNLTTNLKRRKQELEAIISTM
ETDNLHGEAEIKSQELNDARLLVEDLTEQLRRVSESIDGQSKQLRRIKDEKTKLKNLEDN
YERTLQDEAKELEQLLSKRNMFLAKQEEYSKKIRELGPLSSDAFETYKRRSIKELHKMLH
RCNEQLQQFSHVNKKALDQYVNFTEQREELQKRQAELDAGDEKIGELIQVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGYLVMMKKKDGHQGDDDQDEDGPREADLEGRVEKYIGV
KVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRRLADMANTQFITTTFRPELVKVSDKIYGVEHKNRVSRVNVVLKEDALDFIEHDQS
HNAE
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaagcaggttataattgaaggatttaagagctacagagaacaagttgctact
gaggccttcagcccaaaagttaattgtgttgttggtgccaatgggtcgggaaagacgaat
ttcttccatgcaattcggtttgtactaagtgaccttttccaaaaccttcggagcgaggat
aggcatgctctactccatgaaggggcaggtcaccaagtattatctgcgtttgtggagatt
gtctttgataatgctgacaatcgaatcccggttgataaggaggaagtgcgtttgcgaaga
accattggtttgaagaaggatgagtatttcttggatggaaaacacatcacgaaaaccgag
gtcatgaatttgctggaaagtgctgggttctctcgctccaatccttattatgttgtgcag
caaggaaagatagcatcattgacactgatgaaagactctgagcggctggatttactgaag
gaaattggtggcactcgggtgtatgaggagagacgtcgagaaagtttgaaaattatgcag
gaaactggaaacaaaagaaggcagataattcaagttgttcagtacttggacgagagatta
aaggaattggatgaagagaaagaggaactgagaaagtatcagcaacttgacaagcagcga
aaatctttggaatatactatttatgacaaggaacttcaggatgctcgccaaaaactggca
gaggtagaagatgctcgaaacaaggtttctgaaacgtcaacaaagatgtataatagcgtg
ctggatgcccatgaaaagtccaaggacttggacaagattatgaaggatctgactaaagag
cttcaagctttatctaaagagaaagaagcaatagaaaaacaaagaacagaagcaataaag
aagcatacagagcttgagcttgatgtgaaagatttgcaggagaagatatctggaaacttc
ggagccaaaggagatgctgtgagacagttgcagactctgcagaaagaaattcaggattca
atggatgaacttgagaaaatgaatcctctgtatgaggatcaagtcatgaaggaaaaggag
atcacaaaaggaataatggaacgtgagaagcagcttagcatactttatcaaaaacaaggt
cgtgccacccagttttcaagtaaagctgctcgtgacaaatggctccaaaaggaaattgat
gatctcgagcgagttctttcttcaaatttggcacaggagcaaaaacttcaggatgaaatt
aaacggcttaatactgagttgagcgagcgggatgcctacattgagtctcgaagaagagag
attgctactattgaatctctcatctctcagtcacatgcagggttcaatcatcataagtca
cagagggacaagttgcaggatgagcgcaagtccctgtggaggaatgaaactgaactttct
gctgaaattgagaagctgagaacagaagttgagaaggctgaaaagagcctggatcatgcg
actcctggtgatgtcaggagagggctaaattctgttcgtaagatttgcagagagtataaa
attcctggggtatttggcccaattattgagttgcttgattgcgatgaaaagttttttact
gctgttgaagtaactgctgggaacagcttgtttcacgttgtggttgaaaatgatgaaata
tcaacacagataatcaggcaccttaattcattgaagggtggacgagttacgtttatcccc
ctaaatagggtgaaggctccacgggtaatttatccacagaattcagatgtggttcctctg
ttaaagaagttaaagtttgctccaaactataacccagcatttgcccaggtatttgcaaga
acagttgtttgtcgagacctggatgtggctacaaaggttgctcgtactgatggtctagac
tgcattactttggaaggtgatcaggtcagcaagaagggtggtatgacaggagggttttat
gaccatagacgttcaaaattgaagtttatgtgtacaatcatacagaacacaaaatctatc
aacatgaaggaagaagaactggagaaaattagatttatgcttcaagagatagaccagaaa
attacagatctcgtaactgaacagcagaaaattgatgctaagcgggcccacgacaaatca
gaactagaacagcttaagcaggacattgccaatgctgataagcagaaaattttgatttct
aaagctcttgggaataaggaaaaatcacttgctgatgtgcggagtcaaattgatcagctt
agagccagtatggccatgaagagggctgaaatgggcacagatctcattgatcatttaact
ccagtggagaaggatcttctctcaagattaaaccctgaaatagcagatcttaaagagaag
cttattttatgcaagacagatcgtattgagactgagtcaagaaaggcagagctcgagact
aatttaaccacaaaccttaagaggcgtaagcaagaactagaggccataatctctaccatg
gagactgacaatttgcatggtgaagctgaaattaagagtcaggaactgaatgatgctaga
ttgttggttgaagatttaacagagcagctcagaagagtttccgaaagcatagatggccag
tcaaagcaactcaggagaatcaaagatgaaaagactaagttaaagaatttggaagacaac
tatgagaggactcttcaggatgaagccaaagagctagagcaacttttgagtaaaagaaat
atgtttcttgctaaacaagaagaatactcaaagaaaatcagggaattgggcccattgtct
tcagatgcttttgaaacgtataagcgaaggagtatcaaagaattgcataaaatgctgcac
agatgcaatgagcagctgcaacaatttagtcatgtcaacaagaaagcacttgatcaatat
gtaaattttacagaacaacgagaagaactccagaaaaggcaagccgagctggatgcgggt
gatgagaaaattggagaacttatacaggttttggatcaaaggaaggatgaatcaatagaa
cgtacttttaaaggtgttgctaggcactttcgagaagttttctcagaacttgtgcaaggt
ggccatggttaccttgttatgatgaagaaaaaggatggtcaccaaggtgatgatgatcag
gatgaggatggaccacgtgaagcggatttagagggaagagtcgagaaatatattggtgta
aaagtgaaggtttcttttaccggacaaggggaaactcagtcgatgaagcagttgtccggg
ggtcagaaaactgttgttgcgctaacgcttatctttgccatccagcgatgtgatcctgct
cccttttatcttttcgatgaaatagatgcagcactggatcctcaataccgaacagctgtt
ggaaatatgatccggcgcctggcagacatggcaaatactcaatttataaccacaacattc
cggccagagcttgtgaaagtttctgacaaaatatatggtgttgaacataaaaacagggtg
agccgtgtcaacgttgtcttgaaggaagatgcattggacttcatcgagcatgaccagtct
cacaatgcagagtaa
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