Prunus dulcis (almond): 117630702
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Entry
117630702 CDS
T07328
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03013
Nucleocytoplasmic transport
pdul03015
mRNA surveillance pathway
pdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117630702
09122 Translation
03013 Nucleocytoplasmic transport
117630702
03015 mRNA surveillance pathway
117630702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117630702
03041 Spliceosome [BR:
pdul03041
]
117630702
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117630702
Spliceosome [BR:
pdul03041
]
Complex C
Other components
EJC/TREX
117630702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
117630702
NCBI-ProteinID:
XP_034219321
LinkDB
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Position
6:complement(17244273..17249215)
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AA seq
722 aa
AA seq
DB search
MSSPYPILDNRPIDQWKVTELKEELKKRKLTTKGLKDDLIKRLDEAIRIERANNGLNGDP
QPVVGVKVVEPRSGSRTPKSIGSGGRKRTEKVDVPVQIDNRAATLDQGNIQEGYILVDKD
ACAIVEEELGQSTTVETTVETSVTVTESVVTEEVVVVQDSQNTEANKGNGNSKPLLENED
PKPLLENEDPKPQLENEDPKPQLENEKPEPQLENVDLKPQLENEALKPQLEIEDLKPQLE
NEGLEPTAKDDMLGSSAPNYQVSEVSTLGSEVKYDSISTDSVSINETIELKDNIIADHVK
LELDIVKPEMVDPSSSTVVPVSGDSHPMDVDEPLEDKASLGEKDDNITNADISKKNDNAD
LGYSEILNLERSSGDDSMEEDVLDSKQIDSKYSSDDVGDIGEKNEVPIVNEESRAGIVGD
DIATDKNDVSVENKNHPALPAEKRKLNDQAAVGSNEPVKRRRWNSENLKVPELQSPLQTP
SVTPKDTFQTPGLKRSFSRSNSTMSEDAPKERVVPPSQKPPTSSLRIDRFLRPFTLKAVQ
ELLGKTGKVTDFWMDHIKTHCYVTYSSAEEALETRNAVYNLQWPPNGGRLLVAEFVDPQE
VQTRVQIPQTPATPISSGPAVPVAPSTSQLQPSPRQPRQQQQQQLPPPPSLPPPPPLTAP
SSARERLPLPPPPPIPEKLDTPIVTLDDLFRKTKSTPRIYYLPLSEEQVAEKLAAQGKNA
KQ
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaccatatccaattctcgataatcgaccaattgatcaatggaaggttacagag
ttaaaagaggagctcaagaagcggaaattgacaaccaagggtttgaaggatgatttgata
aagcgtttggatgaagcaatacgaattgaaagggcaaataatggtcttaatggtgatccc
caacctgttgttggggtgaaagttgtagagccacgttcaggttctagaacacctaaaagt
attggttctggtggacgtaaaaggactgaaaaagttgatgttccagttcagattgacaac
cgcgcagcaaccttggatcaagggaatattcaagaaggttatattttggtggataaagat
gcatgtgctattgttgaagaggagctgggtcaatcaactactgtggaaaccactgtggaa
accagtgttacggtcaccgagagtgtggtaactgaggaagtagtagttgtgcaagattca
cagaacactgaagccaataaggggaatgggaattcaaagcccctactggagaatgaggac
ccaaagcccctgcttgagaatgaggacccaaagccccagcttgagaatgaggatccaaag
ccccagctggagaatgagaaaccagagccccagctggaaaatgttgatctaaagccccag
ctggagaatgaggctctaaagccccagttggagattgaggatctaaagccccagctggaa
aatgagggtttagagcctacagccaaggatgacatgctcggctcttctgctccgaactac
caggtatctgaggtcagcactttagggtctgaagtaaaatatgattctatttctactgat
tctgtctcaattaatgaaacgattgaactaaaggataatataattgctgatcatgtcaaa
ttagaattagatattgttaagccggagatggtggacccatcatccagcactgttgttcca
gtcagtggtgattcacatccaatggatgttgacgagccacttgaggacaaggcatctctt
ggagagaaagatgacaacattacaaatgcagacattagcaagaaaaatgataatgcggat
ttggggtactcagagatattaaatttagagagaagttctggagatgattctatggaagaa
gatgtgttggacagtaaacaaattgattcaaaatatagttctgacgatgtgggagatatt
ggtgagaaaaatgaagttcctattgtgaatgaggaaagtcgtgctggtattgtgggagat
gatattgccacagacaaaaatgatgtaagtgttgagaacaagaatcatccagctcttcct
gctgagaaaagaaagcttaatgatcaggcagcagttggaagcaatgagcctgtaaagagg
cgcaggtggaactctgaaaaccttaaagttccagagctgcaaagccctcttcaaacacct
tcagtcacacccaaggatactttccagacccccggtttgaagcgtagcttttcaagatcg
aactctacaatgagtgaggatgcccccaaggaacgtgttgttccaccatcgcagaagcct
ccaactagttcccttagaattgatcgttttctgcgacctttcaccttgaaagctgtgcaa
gaacttttaggcaaaactgggaaggttactgatttctggatggaccacatcaagactcat
tgctatgttacttattcatcagcggaagaagccttggagacacggaatgctgtgtataac
ctacagtggcctcccaacggtgggcgccttttagtggccgagtttgttgatccccaggaa
gtgcaaacacgggttcagattcctcagactcctgctacacccatcagtagcggtcctgct
gttcctgttgccccatccacctcacagctgcagccctcaccccgtcaacctaggcagcag
cagcagcagcagcttccgccacctccttctcttccacctccgccacctttgactgcccct
tcctcagcaagagaacggcttcctttgcctcccccacctcctataccggagaaacttgat
acaccgattgtcactttggacgatctctttcgaaaaaccaagtcaactcctcgaatctat
tacttacctttgtcggaagaacaagtggctgaaaaacttgcagcacagggcaaaaatgcc
aagcagtag
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