Prunus dulcis (almond): 117630793
Help
Entry
117630793 CDS
T07328
Name
(RefSeq) protein CHROMATIN REMODELING 20
KO
K10779
transcriptional regulator ATRX
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdul03000
]
117630793
03036 Chromosome and associated proteins [BR:
pdul03036
]
117630793
Transcription factors [BR:
pdul03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
117630793
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
117630793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADD_ATRX
CTD2
HUN
N36
Motif
Other DBs
NCBI-GeneID:
117630793
NCBI-ProteinID:
XP_034219463
LinkDB
All DBs
Position
6:28756729..28769952
Genome browser
AA seq
1577 aa
AA seq
DB search
MQPSGFSSSLPHSILFVFLLFGKSTISFPLSIQTSSNSIYILHGARRGTQRGRQKEEQRQ
RLCIFSPHVATCLPPILVMEESHKQVEESHEQVEDIDSASNGSDSDSFIDDSEVDEVSTS
GQDDKLHPEEPLSDKEIEELIAEFLEVESKAAEAQEALEKESLVKVESEVREELAQTLHG
DDLETAVADEMTILMEEWQAELDDLETESAHLLEQLDGAGIELPSLYKCIESQAPNGCCT
EAWKRRIHWVGSQVTGEFTESRTDAEKYLQAHRPVRRRHGKLLEDGASGFLQKKLTIDGN
KDAVTAEVDWCSLNKLFSDGATGDGASFGSKHWASVYLANTPQQAAEIGLKFPGVNEVEE
IDDIDGNSSDPFVAAAIANERELDLSEEQKKNYRKVKEEDDAYVDRKLQIHLKRKRHQKR
RKQDVGSKEVFPVDRVIESNMAQSPSLLDSATCISNGKIDEHGEIFSNNDDEIGCQNMKS
SVLEDLETSNNVDQESIMSNGSSPVPDSSESRGSKRLNEDEELNLDNKRGRTVIIDSDDD
APLKDISDCNLIKSEDQSNADASISISATGGLPSHGLNKKVYCTACNKLAVEVRSHPLLK
VIICTDCRCLLDEKMHEKDPDCCECYCGWCGQSKDLVSCKSCKTLFCTTCIKRNIGEECL
SEAQTCGWRCCFCCPSLIQTLMLQLEKAIGSGDMVVSSSDSDSDNSDAELDVAISSKRKR
KKRIRRIIDDTELGEETKRKIAIEKERQERLKSLQVQFSAKSKMKSSASCNGNLPEGASA
EVLGDASAGYIVNVVREKGEEAVRIPPSISAKLKTHQITGVRFMWENIIQSVRKVKAGDK
GLGCILAHMMGLGKTFQVIAFLYTAMRSIDLGLKTALIVTPVNVLHNWRQEFMKWRPSEL
KPLRVFMLEDVSRERRAEVLAKWRAKGGVFLIGYSAFRNLSLGKHVKDRHMAREICHALQ
DGPDILVCDEAHVIKNTRADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL
GSSHEFRNRFQNPIENGQHTNSTVDDVKIMNQRSHILYEQLKGFVQRMDMNVAKKDLPPK
TVFVIAVKLSPLQRKLYKRFLDVHGFANDKVYNEKIRKRSFFAGYQALAQIWNHPGILQL
RKDDKDYARREDAIENFLADDSSSDENIDDSLVFGEKQRKINDILPGKKDDDIFQQDWWN
DLIHENNYKELDYSGKMVLLLDVLAMCSDVGDKALVFSQSIPTLDLIELYLSRLPRHGKK
WKFWKKGKDWYRLDGRTESSERQKLVERFNDPLNKRVKCTLISTRAGSLGINLHAANRVI
IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ
QVHRTISKEEMLHLFEFGDDENHELGQDKGCSDQNMTGEVEILPKHKVPLSQGSCSSDKL
MEGLLGKHYPRWIANFHEHETLLQENEEEKLSKEEQDMAWEVYRRALEWEEVQRVPLNES
AVDRKPAALNVASSAPEMSSLAESKAKDISVQRKCTNLSHLLTLRSQGTKIGCTTVCGEC
GREICWKDLHRDGRLAR
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atgcagccatccggcttctcgagctcgttgcctcattcaattctttttgtatttttgctt
tttgggaaatccaccatttcatttcctctttcaattcaaacaagttcaaacagcatatat
atactacacggagccagaagagggacacagagagggaggcagaaggaagagcaaagacaa
aggctctgcattttctcacctcacgtagccacgtgccttccccctattctggtaatggag
gaaagccacaagcaagtggaggaaagccacgagcaagtggaggatattgatagtgcttct
aatggcagtgatagtgattcttttatagatgactcagaagttgatgaagtttcgacatcc
ggacaagacgacaaattgcatccagaggaacctttatctgataaagaaattgaggagctt
attgctgagtttttggaggttgagagtaaggctgcggaagctcaagaagcacttgaaaaa
gagtctcttgtcaaagtggagagtgaagttagagaggagttggcacaaactcttcatggg
gatgatctggaaacagctgttgcagatgaaatgactattttaatggaagagtggcaagct
gagcttgatgaccttgagactgagagtgctcatttgttggaacaacttgatggggctggc
attgagctaccaagcctttataagtgcattgaaagtcaggctcctaatggttgctgcact
gaagcttggaaaaggcggatacactgggtaggatctcaagtgactggagaatttactgag
tcaaggaccgatgcagagaagtatctccaagcccacagacctgtaagaaggcgacatggt
aaactattggaagatggcgctagtggatttctgcagaaaaagctaaccatagatggaaac
aaggatgctgtgactgctgaggttgattggtgttctctcaacaaactattttctgatggt
gcaactggggatggtgcttcatttggcagtaagcactgggcttctgtttacttggccaat
acgccacaacaagctgctgagattggactcaaattccctggtgtgaatgaggtggaggag
attgatgatattgatggcaattctagtgatccatttgttgcagctgccattgcaaatgaa
agagaactggatctgtctgaagaacaaaagaaaaattataggaaggtcaaagaagaggat
gatgcatatgttgatcggaagcttcaaattcatttgaaacggaagagacatcaaaagaga
cgtaaacaggatgttggcagcaaggaagttttcccagttgatcgggtgatagaaagcaac
atggcccagtctccgtctctgctagactctgctacctgtatctcaaatgggaaaattgat
gaacatggtgaaattttttctaacaatgatgatgagataggatgccaaaatatgaagtct
tctgtgcttgaagatttggaaacctctaataatgtcgaccaagaaagcataatgagtaat
ggttcttctccggtgcctgattctagtgaatcaagaggctccaagcgtctgaatgaggat
gaggaactaaaccttgataataagaggggtcgaactgttataatagatagcgatgatgat
gctccactgaaagatatttcagactgcaatttgataaaatctgaggaccagtccaatgcg
gatgcgagtatcagcatatctgccactggtggtcttccttcacatggtctgaataagaag
gtctactgcactgcttgtaataaacttgctgtcgaagtgcgctcacacccacttctgaag
gtgattatttgtacagattgcagatgcttattggacgaaaagatgcatgagaaggatcct
gattgctgtgagtgctattgtgggtggtgtgggcaaagcaaggaccttgtaagttgtaaa
tcttgcaagacgttgttttgtacgacttgtataaaaagaaatattggagaggaatgctta
tccgaggcccagacctgtggctggcgatgttgtttctgttgcccaagtcttatacagaca
ttgatgttacaattagagaaagcaataggttctggagatatggtagtttctagctctgat
agtgattcagataattcagatgcagaactagatgttgctatcagttctaagaggaagaga
aagaagagaattcggaggatcattgatgatactgaattaggagaagagaccaaaagaaaa
attgcaattgaaaaggaacgtcaggaacgcttaaagtctttgcaagtacaattttctgcc
aaatctaagatgaagagctctgcaagctgtaatgggaatttacccgaaggtgccagtgct
gaagtgctgggtgatgcatcagctggatatatagtgaatgttgtgagagagaagggtgaa
gaagcagtcagaatccctccaagcatctcagcgaaactgaagacacatcagattacgggg
gtaagatttatgtgggagaatatcatacagtcagtcagaaaagtgaaggctggggataaa
ggtcttggatgcattctggctcacatgatgggccttggtaaaacttttcaggtcatagct
tttctgtacactgcaatgagaagtattgatttgggattgaaaactgcacttatagtcact
cctgtgaatgtgctacataattggcggcaggagttcatgaaatggagaccttccgagcta
aagcctcttcgcgttttcatgctagaagatgtgtcaagggaaagaagagcagaggttctt
gcaaagtggagagctaagggtggtgtttttttaattggctactctgcttttaggaaccta
tcccttggaaagcatgtgaaggatcgacacatggctcgagaaatttgtcatgccttgcag
gatggacctgatatacttgtttgtgatgaggcccatgttataaagaataccagggctgat
gtaacccaagccttgaaacaagtgaaatgccaaagaaggatagcattaactggatcacct
ctccagaacaatctcatggaatattattgtatggttgattttgtaagggaaggttttctt
ggaagcagccatgagtttaggaatcgcttccagaatcccatagagaatggccagcatact
aattcaaccgtggatgatgtgaaaattatgaatcaaaggtctcatattctgtatgaacaa
ttgaaaggatttgttcagagaatggacatgaatgtggcaaaaaaggacttgccaccaaaa
actgtttttgtaatagctgttaagctctctcccttacagaggaaattatacaagagattt
cttgatgtgcatggattcgctaatgacaaggtttacaatgaaaagataaggaagagaagt
ttttttgctggctaccaggccttagctcagatatggaaccacccagggatcttgcaacta
agaaaagatgacaaagactatgcgagacgcgaagatgctattgagaattttcttgcagat
gacagctctagtgatgaaaacattgacgatagtttggtttttggagagaagcagaggaag
atcaatgatattttgccagggaaaaaggatgatgacatttttcaacaggattggtggaat
gatcttattcatgagaataattataaagagcttgattacagtggcaaaatggtattgctg
cttgacgttctcgccatgtgttctgatgtgggcgataaggcgttggtgtttagccagagc
ataccaacacttgacctcatagaactttacctttcaagactacctcgacatgggaagaaa
tggaagttttggaagaaaggaaaagattggtacaggctagatggaagaacagagagctca
gaaaggcaaaaattggttgagcgctttaatgatcccctaaataagagggtgaaatgcact
ctgatttccaccagagctggatctttggggataaatctccatgctgctaatcgtgtaatc
atagttgatggttcttggaatccgacatacgatcttcaggctatataccgtgcttggagg
tacggccaaacaaagccggttttcgcttacagattgatggcacatggaaccatggaagaa
aaaatttataagcgtcaggtaacgaaggagggcctggctgcaagggttgttgatagacaa
caggtacataggacaatatctaaggaagagatgttgcatctttttgaattcggtgatgat
gagaatcatgagcttggccaagataaaggatgctcggaccaaaatatgactggtgaagtt
gaaattttgcctaaacacaaagtgcctctttctcaaggaagttgctcttctgacaagcta
atggaaggtttacttggcaagcactatccaaggtggattgccaatttccacgaacatgag
actcttttgcaagagaatgaagaggaaaagctctcaaaggaggagcaagacatggcttgg
gaagtataccggagagcattggaatgggaggaagtgcagagagttcctctcaatgaatct
gcagtcgaccgaaagccagctgcactaaatgtggcctcatctgcaccagagatgagcagc
cttgctgaatcgaaagcgaaggatatttctgtgcagcggaaatgcactaatctttcacat
ttgctaacccttagaagtcaggggacaaaaattggttgcactactgtgtgtggggaatgt
ggtcgtgagatatgctggaaggatctgcatcgggatggcaggcttgcaaggtga
DBGET
integrated database retrieval system