KEGG   Prunus dulcis (almond): 117630859
Entry
117630859         CDS       T07328                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    117630859
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pdul03041]
    117630859
   03400 DNA repair and recombination proteins [BR:pdul03400]
    117630859
Spliceosome [BR:pdul03041]
 Complex B
  Other components
   Prp19 complex
    117630859
 Complex C
   Prp19-CDC5 complex
    117630859
DNA repair and recombination proteins [BR:pdul03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    117630859
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 117630859
NCBI-ProteinID: XP_034219564
LinkDB
Position
6:28630633..28637004
AA seq 1014 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDDNYEPGDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDTRQRKRKRKGIDYNAEIPFEKKPPPGFYDVADEDRPVEQPQFPT
TIEELEGKRRIDVEAQLRKQDIAKNKIAQRQDAPSAILQANKLNDPETVRKRSKLMLPAP
QISDHELEEIAKMGYASDLAGSEELTEGSGATRALLANYSQTPRLGMTPQRTPQRTPSGK
GDAIMMEAENLARLRESQTPLLGGDNPELHPSDFSGVTPRKKEIQTPNLMLTPSATPGGA
GLTPRIGMTPTRDSFGMTPKGTPIRDELRINEEIDIHDSAKLEQRRNLQFGLGNLPQPKN
EYQIVMQPVPEDNEEPEEKIEEDMSDRLARERAEEEARQQALLRKRSKVLQRELPRPPAA
SLEFIRNSLTRADGDKSSFVLPTSVEQADEMVKKELLSVLEHDNAKYPLTEKVDKRKKKG
AKRSAGGPSASVPVIEDFEEDEMTEAGSMIKEEAQYLRVAMGHEEESLDEFVEAHKTCLN
DLMYLPTRGAYGLSSVAANMEKLAALQNEFENVKKKMEDDIQKAASIESKVKVRTYGYEM
RAKDGLWPKIEETFKQMDTAAKELECFKALQKQEKLAASHRINNIWEEVQKQKELERNLQ
KRYGDLVVEVERVQHRMDEYRAQAEKQEEIAAMNCDQELAEATENVTVLQTTENPDPTTA
SDELGSTVPGGASNGEATNLQMDGDKDIDAVKDRETVSRDVNLPANMPSAVEGENDPNSQ
LTSSGGIHSSGVAAQDSVSKGDNVSNNLVATENKMVNDPDDGVISDNMTSSAVAEDQKVE
MQQNLTELEGSVQAAGDGGLANGSTTIVSIEGEVENSAENAAPNLNVFNGEETV
NT seq 3045 nt   +upstreamnt  +downstreamnt
atgaggattatgatcaaaggaggtgtgtggaagaacaccgaggatgagatcctcaaggcg
gcggtcatgaaatacgggaagaaccagtgggctcgaatatcgtcgctcttggttcgcaaa
tcggctaagcagtgtaaggctcgctggtacgaatggctcgacccctccatcaaaaagact
gagtggactagagaagaggatgagaagcttcttcatcttgctaagctcatgcctacacaa
tggagaaccattgccccaattgttggtcgtacaccatcccaatgtctggagcggtatgag
aaactgcttgatgcagcctgcgttaaggacgacaactatgaaccaggtgatgatccacgg
aaattgcgccctggagagattgaccccaatcctgagtcaaagcctgctcgcccagatcct
gttgatatggatgaggatgagaaggagatgctttccgaggcacgagctcggttagcaaac
actaggggcaagaaggccaaaaggaaagccagggagaaacagcttgaagaggccagaagg
cttgcttcactacagaaaagaagagaattaaaagctgctggaattgatactagacagcga
aagaggaaaaggaagggaatagactacaatgccgaaattccctttgagaagaagcctcct
ccaggcttttatgatgttgctgatgaagatagacctgtggaacagcctcagttccctacg
accattgaggaacttgaagggaaaagaaggattgatgtggaagcgcagttaagaaagcaa
gatattgcaaagaacaaaattgctcaaaggcaggatgctccctcagctattctacaagcc
aacaagttgaatgatccagaaacagttaggaagagatcaaaactgatgcttcctgcaccc
caaatttcagaccatgagctggaggaaattgcaaagatgggttatgcgagtgatcttgca
gggagtgaagaactcacagaagggagtggtgcaactcgagctcttcttgcaaactattcc
cagacaccaaggttgggaatgacacctcaaagaacacctcaaagaacaccttctggaaag
ggtgacgcaatcatgatggaagcagaaaatttggccaggttgagagagtctcaaacaccg
ttattaggaggagataatccagagttgcacccatcagatttttctggggtcactcctaga
aaaaaggaaattcaaacaccaaatctgatgctgactccttctgcaactcctggaggtgcg
ggtcttacacctagaattggcatgactccaacaagggattcttttggcatgactccaaag
gggactcccattagggatgagctccgtatcaatgaagaaattgatatacatgatagtgca
aaattggagcaacgaagaaacttgcaatttggtttaggcaatttaccacagccgaagaat
gagtaccagatagtcatgcaaccagttccagaagataatgaagaacccgaggagaaaatt
gaagaagacatgtctgataggctagctagagaaagagctgaggaagaagcacgccagcag
gcgttacttaggaagagatcaaaagtattgcagagggagctccccagaccaccagctgcc
tcattggaatttattagaaattccttgacaagagcagatggagacaagagttcctttgtt
cttcctacttcagttgagcaggctgatgaaatggttaaaaaggaacttcttagtgtactg
gagcatgataatgccaagtatccacttactgagaaagtagacaaacggaaaaagaaaggt
gccaagcgcagtgctggtggacctagtgcttctgtccctgtgatagaagattttgaagaa
gatgaaatgacagaggctggttcaatgataaaggaagaggctcagtatcttcgtgttgca
atgggccatgaagaagaatcccttgatgaatttgttgaagcacacaaaacttgcctaaac
gatctcatgtacttgcctactcgtggtgcttatggtctatcaagcgttgctgcaaatatg
gagaaacttgcggcattgcagaatgaatttgagaatgtgaagaagaagatggaagatgat
atccagaaggcagcaagcattgagagcaaagttaaagttcggacatatggttatgagatg
cgagctaaagatggtctttggccaaaaattgaggagacttttaagcagatggacacggct
gcaaaagaacttgagtgcttcaaagctttacagaagcaagaaaaattagcggcatcacac
cggataaataatatctgggaggaagttcagaaacaaaaggagcttgagcgaaatttacaa
aagcggtatggagatcttgtagtggaggtggaaagggtacagcaccgtatggatgaatac
agagcacaagcagaaaaacaagaagaaattgcagccatgaattgtgatcaagagttggct
gaggccacagaaaatgtgactgttctgcagacaactgagaatcctgatcctacaactgct
tcagatgagcttgggagcactgttcctggtggtgcatctaatggtgaagctacaaatctg
caaatggatggtgataaggacattgatgctgtaaaagatcgcgagacagtgtccagggat
gttaacttacctgctaacatgccttctgctgtggaaggagagaatgatccaaattctcag
ctcactagctcaggtggaatacactccagtggggttgcagctcaagactctgttagcaaa
ggagataatgtttctaacaatctggttgcaactgaaaacaaaatggtaaatgatcctgat
gatggggtaattagtgacaatatgacaagtagtgctgtagccgaggatcaaaaagttgag
atgcaacagaacttgactgaacttgaaggcagtgttcaagcagcaggggatggtggtttg
gctaatgggagtaccaccattgtttctattgaaggagaggtggagaattcagctgaaaac
gcagcaccaaatctaaacgtgttcaatggtgaggagacagtgtag

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