Prunus dulcis (almond): 117630960
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Entry
117630960 CDS
T07328
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdul04131
]
117630960
04121 Ubiquitin system [BR:
pdul04121
]
117630960
Enzymes [BR:
pdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117630960
Membrane trafficking [BR:
pdul04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
117630960
Ubiquitin system [BR:
pdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117630960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
Rad50_zn_hook
VPS18_RING_C
DUF7573
Zf_IFT144_1st
CxC4
Motif
Other DBs
NCBI-GeneID:
117630960
NCBI-ProteinID:
XP_034219734
LinkDB
All DBs
Position
6:complement(23873625..23875471)
Genome browser
AA seq
354 aa
AA seq
DB search
MASLGSASYWCYTCSRSIRVRIRAQDSILCPDCGAGFIEEIQTPTRSPLHHPFPTAAMFL
DNTPISQSPSPPNLRRSQRSSRDRSPFNPVIVLRGPPDTESDPGSFELYYDDGAGLGLRP
LPSSMSDFLMGSGFDRLLHQLTQLENGVARLDHPPASKAAIESMPVIKIADDHVSTESHC
AVCKEAFELDSEAREMPCKHIYHSDCIFPWLSIRNSCPVCRHQLPTDVRGPRGSGRASPE
NNGVVGEEETVGLTIWRLPGGGFAVGRFTGGRRAAERELPVVYTEMDGGFNTAGAPRRIS
WASRRRARESGGFAQAFRNFFSFFGRFRSSRSGSGNVFSRSSRRRSQRWALEDN
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggcttccctgggctccgcctcatactggtgctacacatgtagccgatcgattcgggtt
cggatccgggcccaagactcgatcctctgccccgattgcggcgccggattcatcgaagag
atccagaccccgactcgatctccgctccaccacccattccccaccgccgcgatgttcctc
gacaacactccaatttcgcagagcccgagcccgcctaatctccgccggagccagagaagc
agccgcgatcgctcaccgttcaacccggttattgtcctccgaggcccacctgacaccgaa
tccgaccctggaagcttcgagctttactacgatgacggagccggtttgggcctccgccct
ctgccgtcgtccatgtcggacttcttaatgggatcgggtttcgaccggctgctccaccaa
ttgacccaattggaaaacggcgtcgcacggctcgaccaccctccggcgtcgaaagccgcc
atcgagtccatgcccgtcatcaagatcgccgacgaccacgtctccaccgagtcgcactgc
gctgtttgcaaagaggcgttcgagctcgactcggaagctcgcgagatgccctgtaagcac
atctaccactccgactgtatattcccatggctttcgattcgaaactcgtgcccggtttgc
cgccaccagctccctactgacgtgcgcgggccgcgtggcagtggcagagcctcgccggag
aataatggtgtggttggagaagaagagacggtggggttgactatctggagattgcctggg
ggcggattcgctgtgggcaggttcaccggaggcaggagagctgctgagcgtgagcttcca
gttgtttacactgagatggatggtgggttcaatacggctggtgctcctaggaggatttca
tgggcttctagaaggagagcgagggagagtggtgggtttgctcaggcttttcgcaatttc
ttctcctttttcgggaggttcagaagctcgagaagcgggtctggtaatgtgtttagtaga
tcatcgaggaggaggagccagcgttgggctttggaagataactga
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