Prunus dulcis (almond): 117631051
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Entry
117631051 CDS
T07328
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16 isoform X1
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdul03009
]
117631051
Enzymes [BR:
pdul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117631051
Ribosome biogenesis [BR:
pdul03009
]
Eukaryotic type
Pre-60S particles
Helicases
117631051
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
KRAP_IP3R_bind
Motif
Other DBs
NCBI-GeneID:
117631051
NCBI-ProteinID:
XP_034219870
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Position
6:complement(20925858..20931953)
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AA seq
603 aa
AA seq
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MAETTDSPMAETMEKPPKDIESEDEEEQTFESLGLDGRLIRALNKKKIDKPTPIQQVAIP
LILQGKDVVARAKTGSGKTFAYLLPLLQKLFTLEPKNKLAPSAIVLVPTRELSQQVYTEV
SSLIELCRVPLKVVQLTSSMPAPDWRTALAALPEILVTTPACVKKCLSDGVLQPTSIDES
LEILVLDEADLLLSYGYEGDIKALTPHIPKRCQCLLMSATSSDDVEKLKKLILHNSYILT
LPEVGDIKDEVIPKNVQQFWISCSARDKLLYILSLLKLELIQKKVLIFTNTIDMGFRLKL
FLEKFGIRSAVLNSELPQNSRLHILEEFNAGLFDYLIATDTSKSKENEDNGESSIEPKKS
RKHAKHKADSEFGVVRGIDFKNVHTVVNLDMPQSAEGYVHRIGRTGRAYSTGASISLVSP
DEMTIFEEIKSFLGDDEKDDSNSIPPFPLLTKNAVESLRYRAEDVAKSVTKIAVRESRAQ
DLRNEILNSEKLKAHFEVNPRDLDLLKHDKALSKKPPAPHLRDVPDYLLDATTKEASKTV
KLARAAMGNTNPARRHGFKRKSKKNKDPLKTFTAEGHKRARRGGMKREGKDGNGNHRQKK
RKT
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaactacggactctcccatggctgaaactatggagaagccacccaaggatatt
gaaagcgaagacgaagaggagcagacgttcgaaagcctcggattagacggtcgtcttatt
cgtgccctaaacaagaagaaaattgacaagcccacccccattcagcaagtcgccatacct
ctcatccttcaaggtaaggatgtggtggccagggcaaagactgggtctggaaagaccttt
gcttatctcctgccgttgcttcagaagttgtttactttagaaccaaagaacaaacttgct
ccgagtgcgattgttctcgtccctactcgagaactttctcagcaggtttatacagaggtc
tcttcattgattgaattgtgtagagttccattgaaagttgtacagttgacaagcagcatg
cctgcacctgattggcgcacagctttggcggcgttacctgagattctggttaccactcca
gcttgtgtaaagaaatgtttgtcagatggtgttcttcagccaacatctattgatgagtca
ctagaaattcttgttcttgatgaggcagatcttctgttgtcatatggatatgagggagat
ataaaagcattaacacctcacatccctaaacgttgtcaatgtcttcttatgtctgccacc
tcaagtgatgatgttgagaaactgaagaagctgattctacataattcttacattttgact
ttaccagaagtgggagatatcaaggacgaggtcatcccaaaaaatgttcagcagttttgg
atatcatgcagtgcacgcgacaagttactgtacatcctttccctcttgaagttggagctg
atccagaaaaaagttctgatatttactaataccattgacatgggattcagattaaaacta
tttctggaaaagtttggaattagatctgctgttttaaattccgagttgccacagaattct
cgtctccacattcttgaggaattcaatgctgggctttttgattatttgattgcgactgac
accagcaaatcaaaagagaatgaagacaatggggaaagtagtattgaaccaaaaaagtct
agaaagcatgctaagcataaagccgactctgaatttggagtagtgcggggaattgacttc
aaaaatgtgcacacggttgtaaatttggatatgcctcaaagtgctgaaggatatgttcat
cgaattggacgtactggaagagcatatagtactggtgcttctatctcccttgtttctcca
gatgagatgacaatttttgaagaaataaaatcctttttgggggacgatgaaaaggacgac
tcaaactcaattcctccatttcctttgctgaccaagaatgcagtggagtctttaagatat
agagctgaggatgttgcaaagagtgtgacaaaaattgctgtcagagaatcgcgagctcaa
gatttgagaaatgaaattctcaattctgaaaagttgaaggctcattttgaagtcaatcca
agagacctagatctgttgaaacatgacaaggctctaagcaagaagcctcctgctcctcac
ctacgcgatgtgcctgattatctattggacgcaacaactaaagaagccagcaagactgtt
aagcttgctagagctgcaatgggaaacaccaaccctgctcgccgccatggatttaagaga
aaatccaaaaagaataaggaccccctcaagactttcactgctgaggggcataagagagct
cgtagaggcgggatgaagcgagaaggaaaagatggcaatggcaaccatagacaaaaaaag
agaaagacctga
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