KEGG   Prunus dulcis (almond): 117631134
Entry
117631134         CDS       T07328                                 
Name
(RefSeq) WD repeat-containing protein 48 isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    117631134
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdul03400]
    117631134
DNA repair and recombination proteins [BR:pdul03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     117631134
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_DCAF12 RAWUL Beta-prop_WDR75_2nd VWA_3_C
Other DBs
NCBI-GeneID: 117631134
NCBI-ProteinID: XP_034219996
LinkDB
Position
6:complement(28054641..28063015)
AA seq 763 aa
MHRVGSAGNTANSTRPRKEKRLTYVLSDADDTKHCAGINCLAVLKASVSGCDYLFTGSRD
GTLKRWALAEDAATCPATFESHVDWVNDAVLAGDNTLVSCSSDTTLKTWNCLSDGTCTRT
LRQHSDYVTCLAATEKNSNVVASGGLGGEVFVWDLEAALTPVSKSGDSMEDDSSNVVNGS
GNALPITSLRTISSSNSISVHTTQSHGYVPVPAKGHKESVYALAMNDSGSLLVSGGTEKV
VRVWDPRTGSKTMKLRGHTDNIRALLLDSTGRYCLSGSSDSMIRLWDLGQQRCVHSYAVH
TDSVWALASTPTFSHVYSGGRDLSLYLTDLATRESLLLCTGEHPILQLALHDDSIWAATT
DSSVHRWPAEGRNPQKIIQRGGAFLAGNLSFSRARVSLEGSTLVPVYKEPIFTIPGTPGI
VQHEILNNRRHVLTKDTAGSVKLWEITRGVVIEDYGKVTFEEKKEELFEMVSIPAWFTVD
TRLGSLSVHLDTPQCFSAEMYSVDLNIVGKPEDDKVNLARETLKGLLAHWLAKRKQRFGA
QASANGDAPSGKEVTTRSITHSRIEVDSNTENDSMVYPPFEFSTASPPSVITEGSQGGPW
RKKITDLDGTEDEKDFPWWCLDCVLNNRLPPRENTKCSFYLHPCEGSAVQILTQGKLSAP
RILRIHKVVNYVIEKMVLDKPLDSANPDTTLAPGLAGGPVQLSAIGDGSFRSGLKPWQKL
KPSIEILCNNQVLSPEMSLATVRAYIWKKSEDLILNYRVVQGR
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgcaccgtgtgggtagtgcagggaacacagccaattccactcgccctcgtaaagagaag
agattaacatatgtgttgagtgatgctgatgacacaaagcattgtgccggcataaattgt
ttggctgtattgaaggcttcagtgtctgggtgtgattacctgttcactggaagccgtgat
ggcacactaaaaagatgggcgctggctgaagatgctgctacatgcccagcaacctttgag
tctcatgtggactgggttaatgatgctgttcttgcaggtgataatacgcttgtttcttgt
tcttcagatactaccctcaagacttggaattgcttgtcggatggaacttgtaccagaact
cttcgtcagcattctgactatgtcacttgtcttgctgcgacagaaaaaaatagcaatgtt
gttgcctctgggggacttggaggggaggtattcgtatgggatcttgaagcagctcttact
ccggtctcaaagtcaggcgattcaatggaagatgactcttcaaatgttgtcaatggttct
ggaaatgcactaccaattacaagtttacgtactatcagctctagcaacagtatttctgtg
cacacaactcagtcgcatggatatgttccagttcctgccaaaggccataaggaatcagtt
tatgctttggcaatgaatgatagtggatcactccttgtctctggtggaacagagaaggtt
gtgcgtgtttgggaccctagaactggttcgaagaccatgaaactaagagggcatacagat
aatatcagggctctgcttcttgattctactggaagatattgcttatcaggatcttctgat
tctatgatcaggctgtgggatcttggtcagcaacgatgtgtgcattcttatgctgtgcac
acagattctgtttgggcacttgccagtaccccaacatttagtcatgtatatagtggtggg
agggacctttctttatacttgacagacttggccacaagagagagtcttttgctttgcact
ggggaacaccccattctgcagttggctttacatgacgatagtatatgggctgcaacaacg
gattcttcagttcatagatggcctgctgaagggcgcaatcctcagaagattattcaaaga
ggtggtgcattcttggctggaaatttgtccttttcgagagcaagggtatccctagaagga
tcaaccctagtccctgtttataaagaaccaatatttacgattcctggaactcctggaata
gtgcagcatgaaatattaaacaatagaaggcatgtcttgacaaaggatactgctggttcg
gtcaagttgtgggagattactaggggtgttgttattgaggattatggaaaggtcacattt
gaggagaaaaaagaagagctttttgagatggtaagcattcctgcatggttcacagtggat
accaggcttggaagtttatctgtacatctggacaccccacaatgcttttcagcagagatg
tattcagtagaccttaacattgtggggaagcctgaagatgacaaggttaatctagcacga
gaaacccttaaagggctcttggctcactggttggcgaaaagaaagcaaagatttggagcg
caagcatctgctaatggggatgcaccatctggaaaggaagttaccactagaagtattacg
cattcaagaattgaggtggatagtaatactgaaaacgattcaatggtctatcctcccttt
gaattttctacagcttcccctccttcagttataactgagggctctcagggaggcccatgg
aggaagaaaatcactgacctagatggtactgaagatgagaaggactttccttggtggtgt
ctcgattgcgtgttgaataatcgcctaccccctagagaaaacaccaagtgcagtttttat
ctacatccatgcgaaggttcagctgttcagatcctcacacaagggaaacttagtgcacct
cgtatattacgaattcataaagttgttaattatgtaattgaaaagatggtccttgacaaa
ccattggatagtgcaaatcctgatacaacacttgctcctggtcttgctggaggaccagtg
caactatcagccattggagatggatcttttcgatctggattgaagccatggcaaaagctt
aagccttctatagagatattgtgtaacaatcaggtcttgtccccagaaatgagcttagcc
acagtgcgggcttatatatggaagaaatctgaggacctgattctcaattacagggtggtt
cagggaaggtga

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