KEGG   Prunus dulcis (almond): 117631188
Entry
117631188         CDS       T07328                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03030  DNA replication
pdul03410  Base excision repair
pdul03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    117631188
   03410 Base excision repair
    117631188
   03420 Nucleotide excision repair
    117631188
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pdul03032]
    117631188
   03400 DNA repair and recombination proteins [BR:pdul03400]
    117631188
Enzymes [BR:pdul01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     117631188
DNA replication proteins [BR:pdul03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    117631188
DNA repair and recombination proteins [BR:pdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      117631188
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 DNA_pol_B zf-DPOE DNA_pol_B_exo2 RNase_H_2 SPOB_ab
Other DBs
NCBI-GeneID: 117631188
NCBI-ProteinID: XP_034220089
LinkDB
Position
6:9524825..9548008
AA seq 2216 aa
MSGFHSRKRDRGSSWSSKKQKVMRSAEEELESKLGFDLFSEGDKRLGWLLTFASSSWEDQ
DTRKVYSCVDLYFVSQDGSAFKSKYKFRPYFYAASKEKTEMDVEAYLRRRYENQIADIEI
VEKEDLDLKNHLSGLRKSYLKLSFDNVQQLMNVKSDLLHVVERNHAKFDAADAYESIVIG
KREQRPQDFLDCIIDLREFDVPYHVRFAIDNDIRCGQWYDVSVSSTGVMLEMRTDLLQRA
EVHVCAFDIETTKLPLKFPDAEYDLVMMISYMVDGQGFLIINRECVGDDIEDLEYTPKPE
FEGFFKVTNVKNEVELLRQWFAHMREVKPGIYVTYNGDYFDWPFLETRAAYHGLKMSDEV
GFQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYHPLEVNPEDMVR
FAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLM
VQAYKANVICPNKHQSDPEKFYKNHLLESETYIGGHVECLESGVFRSDLPTSFKLDASAY
EQLINNLDRDLQYAIRVEGKMDLESVSNYEEVKSSILEKLVGLRDEPIREESPLIYHLDV
AAMYPNIILTNRLQPSSIVTDEICTACDFNRPGKTCLRKLEWVWRGEIFMAKKSDYYHLK
KQIESEFVDGANSKLSKSFLELPKMEQQSRLKERLKKYCQKAYRRVVDKPVTELREAGIC
MRENSFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLA
HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCA
LPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLTDPTGNSYTTHSECS
IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE
LFDKFLHGSTLEECYSAVASVANRWLDLLDNQGKDVADSELLEYISESSTMSKSLADYGE
QKSCAVTTARRLANFLGDSMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEIMKF
YVRKWCKVSSDVGIRSIIDWSYYKQRLGSAIQKIVTIPAAMQKVSNPVPRVAHPDWLHKK
VREKDDKFRQRKLVDMFRSLNRDHLLEKNSDAIGPNHVIDEEIVEDLEDFNRKSSSINRP
RPIVRCYEVNNKKNSVEIAGQIDSQQQRTNNKENELQVQNTVSSEAIDRNVDYHGWLQIK
KRKWKDTLDRRKKQRLNNARSVHHANNEVLGGGRNHKEPQGKGVNSYFRRNEEALTRCHW
QIIQLVPSSQGDQFSAWVVVEGIMLKIPVTVPRVFYINSKAPIEKLFEKISEEKPQGKNV
NKTLPHGRRAYNLYEAIIDEDRFKTLSKKLAALLGDPEVEGIYETKVPLEFNAIVQIGCV
CKVDKTAKKRNVQDGWSVSELHMKTTTECTYLDESISFFYLYQSTSEGRAIFIAYFPSSR
TITVVVVNPYQNKDLSASFLEKQFREACQALSIQPPPRNGIIIKVDYVGFPKDAEMILHR
AINEHRHEHHGPTVAVIECPNFQLMKSSIGALDDFPCVSIPSNARDSNYQVLGWQQVAAK
IGMQRCAASPQWLRERISLSRYAHVPLGNFELDWLIHAADIFFSRALRDQQQVLWISDDG
NPDLGGINEEDTCFADEVYQHDFSFPGAYRKVTVELKIHHLAVNALLKSNQVNEMEGGAL
LGFESDVNSTSDLHVGFDEATSSAHTLRVLKQLIQRCLANAVTSGNVYADALLQHLYRWL
CSPQSKLHDPTLHRILHKVMSKVLAILMIEFRKLGAKIIFANFYKVIIDTGKFDLSGAKA
YCDSLLKTLQARELFEWIELEPLQFWHSLLFMDQYNYGGIPARADGSMHGEAQMDIVSSW
NIAEYLPKKIQDHFVYIVSQFLYIPWDYEQKQAAVRTSLQNDSNCTPSITVAAAETFESH
MIDFLKGQISSYFTDKLLGIVHDTILHMKELNKSEDGHHRSPGLPQLAGDIHKGDAALEF
IKHVCGVFSLDQNVHHDVMVMRRNLLKYLRVREFAPEAEFRDPCAFFTLPNVICSYCNDC
RDLDVCRDSALLTGEWRCVVPQCGQPYDREVMENALLQIVRQRERLYHLQDLLCLRCKQV
KAAHLADQCVCAGSYKCREDATKFRSKMELIWKIAIHQKFQLLQECTEWILEVDHS
NT seq 6651 nt   +upstreamnt  +downstreamnt
atgagcggcttccacagccgaaaacgggaccgtggaagctcatggagctccaagaagcag
aaggttatgcgcagcgccgaggaagagctcgagtcgaagctagggttcgatctgttctcc
gaaggcgataagcggctcggatggctgctcactttcgcatcctcatcttgggaggatcaa
gacacccgtaaggtttatagttgcgtcgatttatatttcgtttcgcaggatggttctgct
ttcaagtcaaaatacaagttccgcccttacttctatgcagcctcaaaggagaaaacggaa
atggatgttgaagcatatttgagacgacgatatgaaaatcaaattgctgatattgaaata
gtggagaaagaagaccttgatctgaaaaaccatttgtctggcctacgcaagtcctaccta
aagctatcatttgataatgttcaacaactaatgaatgtcaagagtgacctattacacgtt
gtcgaaagaaaccacgcaaaatttgatgctgcagatgcttacgagtcaatagtaatagga
aaaagagaacaaaggcctcaggattttctagattgtattattgatcttcgtgaatttgat
gttccctaccatgtccgctttgccattgacaatgatataagatgtggccagtggtatgat
gttagtgtatccagtactggtgttatgcttgagatgaggacagatcttctgcagcgcgct
gaagttcatgtttgtgcatttgatattgagacgactaagctacctttgaaatttccagat
gctgaatatgatttagtaatgatgatttcgtacatggttgatggacaaggtttcctgatt
attaacagagagtgtgttggggatgatatagaggatctggagtacactccaaaaccagaa
tttgaagggtttttcaaggtgacaaatgtgaagaatgaggtagagcttctaagacagtgg
tttgctcatatgcgggaggtgaagcctggaatttatgtcacatacaatggtgattatttc
gactggcctttcctggaaaccagagctgcatatcatgggttaaaaatgagtgatgaggtt
ggatttcaatgtgacaagaaccagggggaatgccgggctaaatttgcttgccatcttgat
tgttttgcttgggtcaaacgtgatagttatcttcctcaagggagccaaggccttaaggct
gttacaaaggcaaagttaggttatcatcccctggaggtgaatccggaggatatggttcgc
tttgcaaaggaaaaacctcagatgatggcatcgtattctgtctctgatgccgttgcaact
tattacttgtatatgacctatgttcatcctttcattttctcacttgcaactattattcca
atgtctccggatgaggttttgcgcaagggtagtggaaccctttgtgaaatgcttctcatg
gtccaggcatacaaggcaaatgttatctgccctaacaaacaccaatctgaccccgaaaaa
ttctataaaaatcaccttttagagagtgagacttatataggtggccatgttgaatgcctt
gaaagtggtgtgtttagatctgatcttccaaccagttttaagcttgatgcctctgcttat
gagcaattgatcaacaaccttgatcgagatcttcaatatgctataagagtagagggtaag
atggacttggaatccgtgtccaattatgaagaagtgaagagttctatattggaaaagctt
gtggggctgcgagatgaacctatacgtgaagaaagcccccttatttatcatctggatgtt
gctgcaatgtatcccaacattattttaacaaataggcttcagccatcctcaatagtaaca
gatgagatctgcactgcttgtgatttcaaccgtccaggaaaaacttgtcttcgcaagctt
gaatgggtttggcgtggagaaatattcatggcaaagaagagtgactattatcatttgaag
aagcaaattgagtctgagtttgttgatggtgccaattccaagctgtcaaaatcttttctt
gagttgcctaaaatggagcagcaatcaaggctcaaagagcgtctaaaaaaatactgtcag
aaggcgtatagacgagtagtggacaagccagtcactgaacttcgggaagcagggatttgc
atgagggaaaattcattctatgttgacacagttcgcagctttcgagatagaaggtatgag
tacaaagggcttaataaggtttggaaggggaagttgtctgaagccaaggctagtgggaat
tctataaaaatccaggaagcgcaagatatggtagtgctttacgattcattacaacttgca
cataagtgtatacttaattccttttatggatatgtcatgcgcaagggtgcaaggtggtat
tccatggaaatggctggagtagttacatatactggagctaaaattattcagaatgctcgc
ttgttggttgagaaaattggaaaacctcttgaattagacacagatggtatctggtgtgcg
ctccctggatcttttccggagaactttacattcaaaacaaaagacttgaagaagaagctg
actatctcatatccatgtgttatgcttaatgttgatgtagcaaggaacaatacaaatgat
caataccagactcttacagatcctactggaaattcttacacaactcatagtgaatgttct
attgaatttgaagtggatggaccctacaaggcaatgattcttccggcttctaaagaagaa
ggaattctaattaagaagcgatatgcggttttcaatgatgatgggacccttgctgaactt
aaaggttttgagatcaagcgtagaggtgagctgaagctcatcaaggttttccaggccgag
ctttttgataagttccttcacggttctactttagaggaatgctattcagcagtcgcttct
gtcgccaatcgctggctcgatctccttgataatcaaggaaaggatgttgcagacagtgag
ttgcttgaatatatatcagagtcaagcacaatgagcaagtctttagcagattatggagag
caaaagtcatgtgcagtgaccactgcaagacgtcttgctaattttctcggtgattcgatg
gtcaaagataaaggactgcgttgccagtatatagttgcatgtgaaccaaagggcacacct
gtaagtgagcgtgctgttccagttgcaatatttgaaacagatgcggaaatcatgaagttt
tatgtacggaagtggtgcaaggtttcatcagatgtcggcattcgatccattattgactgg
tcctattacaagcaacgtcttggttcagcaattcagaaaattgtcaccattccggctgca
atgcaaaaggtctcaaatcctgttcctagggtagctcatcctgattggctgcataagaag
gttcgtgagaaagacgacaaatttcgacagcgcaaattggttgatatgttcagatcattg
aacagggatcatttgctggaaaagaacagtgatgctatcggccctaatcatgtgattgat
gaagagattgttgaagatttggaagacttcaacagaaaaagcagttccataaatagaccc
agaccaattgtccgatgttatgaagttaataacaagaaaaattcagtcgagatagcaggt
caaatagattcacagcaacaacgaactaataataaagaaaatgagcttcaagtgcaaaat
actgtctcttctgaagctattgatagaaatgtagattatcatggctggcttcaaataaag
aagaggaaatggaaagatactcttgacaggaggaagaagcaaagattgaataatgcaagg
tctgtgcaccatgctaataatgaggtgcttggtggtggtagaaatcataaagaaccacag
gggaaaggcgttaattcatattttaggaggaatgaagaagccctaacacgctgtcactgg
cagataatacaactagttcccagttctcagggtgaccaattttctgcttgggttgttgtc
gaaggaatcatgcttaagattcctgttactgttccaagagttttttacatcaattctaaa
gcacctatagaaaaactatttgaaaaaatttctgaagaaaaacctcaaggaaagaatgtc
aacaagactcttcctcatggaaggcgtgcctacaacctgtatgaggctataattgatgag
gatcggtttaaaacattaagcaaaaaacttgcagcccttcttggcgatccagaagttgag
ggaatatatgaaacaaaagtgcctttggagttcaatgcaattgttcagattggttgtgtc
tgtaaagtggataaaactgctaagaagagaaacgtccaggatggttggagtgtgagtgaa
ctgcacatgaagacaactactgagtgcacatatctggacgaatcgatctctttcttttac
ttgtaccagagcacatctgaagggcgagctatatttattgcctattttccttcatcaaga
acaataactgttgtggtggtaaatccttatcaaaataaagatttgtcagcatcttttctt
gagaaacaatttcgtgaagcttgccaagcattatcaattcagccaccccctaggaatggt
atcattattaaggttgactatgttggatttcccaaggatgctgaaatgattttgcaccgt
gcaattaatgagcacagacatgaacatcatggacctacagttgctgttattgaatgccca
aattttcagttgatgaagtcgagtataggagctcttgatgattttccttgtgtgagcatt
ccctctaatgctcgtgatagtaactatcaggttcttgggtggcaacaagtggcagcaaaa
attggaatgcaacgttgtgctgcatcacctcagtggttgagggagagaatttccctctca
agatatgcccatgtaccattgggtaattttgaacttgactggcttatacacgcagcagat
atcttcttttcaagagcactacgggatcagcaacaggtgctttggatatctgatgatggt
aatccagatctaggaggcattaatgaagaagatacatgttttgccgatgaggtctatcaa
catgacttttctttcccaggagcatataggaaggtcactgtggagctaaagatacatcat
ctggctgtaaatgctcttctgaaaagcaaccaggtgaatgaaatggaaggaggtgctttg
ctaggatttgaatcagatgtgaactctacgtctgatctacatgttggctttgatgaagct
acctcatctgcacataccctccgtgtcttgaaacagttgatccagagatgtcttgccaat
gcagtaacatctggaaatgtgtatgctgatgcactactgcagcatctatatcgatggctt
tgcagcccccagtctaaacttcatgatccaactcttcaccgcatactccacaaggtcatg
tcaaaggtgcttgcaattttaatgatcgaattccgcaaattgggtgccaagattatattt
gcgaatttctacaaggttattatagacacaggaaagtttgatctgtcaggagccaaagct
tattgtgatagcttgcttaaaacactgcaagcaagagaactatttgagtggattgagctt
gaaccattgcaattctggcattccctgctgttcatggatcagtataactatggtggaatt
ccggcaagagctgatggaagcatgcatggtgaagctcaaatggatattgtatcaagctgg
aatattgctgaatacttacccaagaaaattcaggaccattttgtttatattgtatctcag
tttctatatattccctgggattatgagcagaagcaggcagcagttagaacatctttacag
aatgacagcaattgcacgccatccatcactgttgcagctgctgagacttttgagtctcat
atgatagattttcttaaaggacagatcagctcatactttacggataaacttctgggaatt
gttcatgataccatacttcacatgaaggagctgaacaaatctgaggatggccatcacaga
tctcctgggctgccacaactcgctggtgatatccacaaaggggatgcagcactggagttc
attaagcatgtctgcggtgttttctcccttgaccaaaatgttcaccatgacgttatggta
atgagaaggaatctgttgaaatatttgcgtgtgagggagtttgcacctgaagccgagttt
cgtgatccctgtgcattcttcaccttaccaaatgtgatttgcagctactgcaatgattgt
agagacctggacgtgtgccgtgactcagctctactaactggggagtggcgctgtgttgtg
ccgcaatgcgggcagccttatgacagagaggtcatggagaatgcccttcttcagattgta
cggcagagagagcgcctctaccatctacaggatctgttatgccttagatgtaagcaagtg
aaagctgcacacttagcggatcaatgtgtatgtgctggctcatataaatgcagggaggat
gcaacgaaattccgtagcaagatggagttaatttggaagattgccattcatcagaaattc
caacttctccaagagtgcactgaatggattttagaagttgatcactcttaa

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