KEGG   Prunus dulcis (almond): 117631275
Entry
117631275         CDS       T07328                                 
Name
(RefSeq) COMPASS-like H3K4 histone methylase component WDR5A
  KO
K14963  COMPASS component SWD3
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    117631275
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pdul03036]
    117631275
Chromosome and associated proteins [BR:pdul03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    ATAC complex
     117631275
    NSL complex
     117631275
   HMT complexes
    COMPASS/SET1 complex
     117631275
    COMPASS/SET1 complex (yeast)
     117631275
    MLL-HCF complex
     117631275
    MLL3/MLL4 complex
     117631275
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     117631275
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd WDR55 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_SCAP WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_NWD2_C WD40_like Beta-prop_WDR19_1st eIF2A Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N RMC1_N VPS8_N WD_LRWD1 PALB2_WD40 Beta-prop_WDR75_2nd KNTC1_N PROPPIN Beta-prop_LRRK2 DUF5888 WDR54 DUF5812
Other DBs
NCBI-GeneID: 117631275
NCBI-ProteinID: XP_034220218
LinkDB
Position
6:20600190..20603067
AA seq 321 aa
MSKDPSESYKPYTLCETLTGHKSAISGVKFSSDGRLLGSSSADKTIRTYSLTFSDDSSSS
TPTISAAQTFEGHSQGVSDLAFSADSRFMVSASDDKTLRLWDVATGQVIKTLHGHTNYVF
CANFNPQSNMIVSGSFDETVRIWDVKTGKCLKVLPAHSDPVTAVDFNRDGSIIVSSSYDG
LCRTWDASTGHCTKTLIDDENPPVSFVKFAPNGKYILVGTLDDTLRLWNFSTGKCLKTYT
GHKSSRFCISSTFSVTNGKYIVSGSEDNCLYLWELQSRKIVQKLEGHTDTVISVSCHPTK
NIIASGALGNDKTVKIWTQEN
NT seq 966 nt   +upstreamnt  +downstreamnt
atgtcgaaggatccatcggagtcctacaaaccctacaccctctgcgaaaccctaacgggc
cacaagagcgccatttcaggcgttaaattctcctccgacggccgcctcctcggctcctcc
tccgccgataagaccatccgcacctactccctcaccttctccgatgactcttcttcctcc
actcccaccatctccgccgcccaaaccttcgagggccactcgcagggcgtctccgatctt
gccttctctgccgactcccgcttcatggtctccgcctccgacgacaagaccctccgcctc
tgggacgtcgccaccggccaggtcatcaagaccctccatggccacaccaactacgtcttc
tgcgccaacttcaatccccagtccaatatgatcgtctcgggttccttcgacgaaacggtg
cgcatttgggatgttaagaccgggaagtgcttgaaggttttgccggctcactccgacccc
gtcaccgccgtcgatttcaatcgggatggctccattattgtctctagtagctatgatggg
ttgtgcaggacctgggatgcctctactggtcactgcactaagactttgattgatgatgag
aatcccccagtttcctttgttaagttcgcgcccaatggcaagtacattcttgttggcact
ttggatgatactttgaggctttggaacttttcaactgggaaatgtctaaagacttacaca
ggtcacaagagctcgagattctgcatttcttccaccttttctgtgacaaatgggaaatac
attgtgagtggttctgaagataattgtctatacctatgggaattgcaaagcaggaagata
gttcagaaattggaaggtcacacggacactgttatatcagtatcgtgccaccccactaag
aacataattgcatccggtgcacttgggaatgacaagacggtgaagatctggacccaggag
aactga

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