Prunus dulcis (almond): 117631411
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Entry
117631411 CDS
T07328
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdul01002
]
117631411
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdul04131
]
117631411
04121 Ubiquitin system [BR:
pdul04121
]
117631411
Enzymes [BR:
pdul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117631411
Peptidases and inhibitors [BR:
pdul01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117631411
Membrane trafficking [BR:
pdul04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
117631411
Ubiquitin system [BR:
pdul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117631411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUF7456
Motif
Other DBs
NCBI-GeneID:
117631411
NCBI-ProteinID:
XP_034220442
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All DBs
Position
6:15628707..15635290
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AA seq
573 aa
AA seq
DB search
MMFEKEVTLKSLIRQFEHGFKALSRSNLISSSGFHISVAGLLGIAGFVLALKDSKLSRLS
SLDWLPKTDNGSPKLRLVPGLQNLGNNCFLNVILQALASCSYFQPFLQKVLEEYEFSAVE
DEVSGFPLAIALAALLEDLRVVGGGRVVLSPRRVMLAMAHYIQNFDLTSQQDAAEAFLHL
LSSLREEFSDCYLPNQCSLVEVFASNCRIITPKRMENQSEQARWQQHYLGPFDGILGSIL
TCQSCSSQISLNLESFHSLPLSPVLDGGETIMVGCNLEDCLKQFTIAERVENYHCNHCWH
IAAVKYLFARGVNEADIEKIKRCTEQDSCDCRRLFHLDKLPWSNKFSCTLKQISVARCPK
ILCIHLKRVSINVFGELVKLQGCISFPLVLDLSQFTTSGSEINSWEDNMRRGQAQGQSRN
PSTRSNQFTMQYDQRKHNNVYGLTRGGISEELASDISRFAANAQDLPGESSFPQTAGFSK
TMHSGGDQWSKSCEDPCLYHLVAVVEHFGRAGSGHYTVYRSVRADLCEEESDDQFEAAAP
CWFSISDSEVCRVSKEAVLAAEASLLFYEKNEG
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttgaaaaagaggtaactttgaagtccttgattcgccaattcgaacatgggttt
aaggctctttctcgttcgaacttgatttcatcttctgggtttcacatatctgtggctggt
cttctgggtattgctggttttgttttagctctcaaagactcgaaattgagcaggctaagc
agcttagactggctgcccaagactgacaatggttctccgaagctgcgcttggtacctggc
ttgcaaaaccttggaaataattgttttcttaatgtgattttacaggctctggctagctgt
tcatactttcaaccctttcttcaaaaggttttagaggaatatgagttctcagcagttgag
gatgaggtttctggctttcctcttgcaatagcattggctgctttattagaagatttacgt
gtagttggtggaggaagagttgtattaagtccacgaagagtcatgcttgcaatggcacat
tatattcagaattttgatctaacaagccagcaggatgcagcagaagcatttcttcatctt
ctgtcctctttaagagaagaattttcagattgttatcttccaaatcaatgttctttagta
gaagtatttgcttctaattgtaggattattactccaaagagaatggagaaccagagtgaa
caggcaagatggcaacaacactaccttggaccatttgatggaattctgggtagcatccta
acatgtcaaagttgttcatcgcagatatcattgaatttggaatcttttcatagtttgcct
ctttcgccagttcttgatggtggtgagacaattatggttggatgtaacttggaggattgc
ctgaagcagtttactattgctgaaagagttgagaattaccattgtaaccattgttggcat
attgctgcggtcaagtatttatttgctagaggagtaaatgaggcagatattgaaaagatt
aagagatgcactgagcaagattcctgtgactgtcgaagactttttcatctagataagcta
ccgtggtcaaataaattttcatgtactctcaagcaaataagtgttgctcgttgcccaaag
attctgtgcattcatcttaaacgtgtttcaatcaatgtatttggagaacttgtaaaactt
cagggctgtatttcttttccattggttttggacctttcacagttcacaacaagtgggtca
gaaataaacagttgggaagacaacatgagaagagggcaagctcagggacaaagtagaaac
ccaagcactcgttccaatcagttcactatgcagtatgatcagagaaagcataataatgtc
tatggattaacgagaggaggaatatcagaagaattagcttcagatatatctcgattcgct
gcaaatgcacaagatttaccaggagaatccagctttccccaaactgcagggttttcaaaa
accatgcactcaggaggagatcagtggtctaagagttgcgaagatccttgtttgtaccat
cttgttgctgttgttgagcattttggaagagctggaagtgggcattacactgtttacaga
agcgtgagagctgatttatgcgaggaagaatctgatgatcagtttgaggctgctgctcca
tgctggttttctatttcagattcagaagtgtgtcgtgtttcaaaggaagctgttcttgct
gcagaagctagcttgctcttctatgaaaaaaatgaaggctga
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