Prunus dulcis (almond): 117631439
Help
Entry
117631439 CDS
T07328
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117631439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdul04121
]
117631439
Enzymes [BR:
pdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117631439
Ubiquitin system [BR:
pdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
117631439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
FAIM1
Motif
Other DBs
NCBI-GeneID:
117631439
NCBI-ProteinID:
XP_034220474
LinkDB
All DBs
Position
6:complement(721932..726400)
Genome browser
AA seq
308 aa
AA seq
DB search
MSPGGHFCEDVAESRMAFADSDVATSTGDVRTSPFRKAAPGLLGIPGMPSNHNVHDLLEC
PVCMNLMCPPIHQCPNGHTLCSSCKVRVHNCCPTCRNELGNIRCLALEKVAESLDLPCRY
QIYGCQDIFPYYSKLKHEKICKYRPYNCPYAGADCSVTGDIQLLMMHLKNDHKVDMHDGC
TFNHRYVKSNPQEVDNATWMLTIFNCFGRQFCLHFEAFHIGTAPVYMAFLRFMGDDDEAK
QFTYSLEVSGSGRKLIWQGIPRSIRDSHRKVRDSQDGLIIQRNLALFFSGGNRQELKLKV
AGRIWKEH
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctggaggtcacttctgtgaggatgtggctgagtctcgtatggcgtttgcagat
tctgatgttgcaacttccactggtgatgtaaggacttcccctttcagaaaagctgcccct
ggtttgcttggaattcctggaatgccatcaaaccacaatgtgcatgacctactcgagtgt
cctgtttgcatgaatttaatgtgtcctccaattcaccagtgtccaaatggccatactctc
tgctcgagctgtaaggttagagtgcacaactgttgccccacgtgtcgcaatgaacttgga
aatataagatgcttggcactggagaaagtagcagagtcgctggatcttccttgtagatac
caaatttatggttgccaagatatattcccatactacagcaagctaaagcatgagaaaatc
tgtaaatatcgtccatacaactgcccttatgctggagctgattgttctgtcacaggagat
atccaactccttatgatgcatcttaaaaatgatcacaaggttgacatgcatgacggatgt
actttcaaccatagatatgttaaatccaatccccaagaagttgacaatgctacatggatg
ttgaccatttttaactgttttgggcgtcagttttgcttgcattttgaggctttccacatt
ggaactgcacctgtttacatggccttcctccggttcatgggtgatgatgatgaggcaaag
caattcacttatagtctcgaagttagcggcagtggcagaaagcttatatggcaaggaatt
cctaggagcatccgagatagccacagaaaagttcgtgacagtcaagatggactaatcatt
caaaggaacttagcactcttcttctccggtggtaataggcaggaactgaagctgaaagtc
gctggtcgtatatggaaagaacactga
DBGET
integrated database retrieval system
