Prunus dulcis (almond): 117631475
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Entry
117631475 CDS
T07328
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdul04131
]
117631475
04121 Ubiquitin system [BR:
pdul04121
]
117631475
Enzymes [BR:
pdul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117631475
Membrane trafficking [BR:
pdul04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
117631475
Ubiquitin system [BR:
pdul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117631475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
Zf_IFT144_1st
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_3
DUF3915
zf-RING_10
zf-HC5HC2H
zf-HC5HC2H_2
Apis_Csd
Atrophin-1
zf-RING_6
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
117631475
NCBI-ProteinID:
XP_034220533
LinkDB
All DBs
Position
6:170994..173317
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AA seq
372 aa
AA seq
DB search
MEEARYWCHVCSQMVDPIMEVEMKCPFCQSGFIEEMNSNTRDSHEADSDFGSDRALSLWA
PILLGMMNNPHRRRRLRRLDFDEDEDDDNDDGGARHGGDTELDRELESIIRRRRRNSATI
LQLLQGIRAGSASESENSESDRDRDRDRDRERERERERERVILINPFSQTIIVQGSYDSN
QGQNNNHTPMGSLGDYFIGPGLDLLLQHLAENDPNRYGTPPAQKEAVEALPTVTIKENLQ
CSVCLDDFEAGVEAKEMPCKHKFHSGCILPWLELHSSCPVCRFQLPADESKRDSDNSRNS
SDQRESENIGGDGGGVEGDGDGRNGSGRRFSIPWPFNGLFSNSGSQSSGSGGNSSSAANA
TGSGSASRTDEN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcaaggtattggtgtcacgtgtgttctcaaatggtggatcccatcatggaa
gtagaaatgaaatgcccattttgccaaagcggatttattgaggaaatgaatagcaacacg
agggacagtcatgaagctgactctgattttggatcagatcgagccctctccctctgggca
ccaatcttgctgggaatgatgaacaatccccatcgacgccgaagattaagacgactagac
tttgatgaggatgaggatgatgataatgatgatggcggggcccgccatggcggagacact
gaattggacagggaacttgaatcaatcatccgaaggaggaggagaaactcggccactatt
ctacagctgcttcaaggcattcgagctggctcggcatctgagtctgagaattctgagagt
gatagggatagggatagggatagggatagggagagagaaagggaaagggaaagggaacga
gtaattctgatcaatcctttcagtcaaaccatcattgttcagggttcttatgattcgaat
cagggccaaaacaacaatcacactcctatgggttcattaggcgattattttattgggcct
ggtttagatttattgctgcaacatttggcagagaatgatcctaacagatatgggactccg
ccagcgcaaaaggaggcagtggaagctctgcccactgtgacaatcaaggagaatttgcag
tgttcagtgtgcttggatgattttgaggctggtgtagaagcaaaagagatgccatgtaag
cataaattccatagcgggtgtattctgccatggctggagcttcatagttcctgtccagta
tgcaggtttcagttgcctgctgatgaatccaaacgcgattctgataattctaggaacagc
agtgaccaaagggagagtgaaaacataggtggtgatggtggtggggtggagggagatggg
gatgggagaaacggaagcggaagaaggttttcaattccatggcctttcaatggtctgttt
tctaactcaggatctcaatctagtggcagtgggggtaattcttcctcagcagcaaatgca
actggaagtggaagcgcttctcgaacagatgagaattga
DBGET
integrated database retrieval system
