Prunus dulcis (almond): 117631490
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Entry
117631490 CDS
T07328
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 51-like isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdul03041
]
117631490
03009 Ribosome biogenesis [BR:
pdul03009
]
117631490
Enzymes [BR:
pdul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117631490
Spliceosome [BR:
pdul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117631490
Ribosome biogenesis [BR:
pdul03009
]
Eukaryotic type
90S particles
Helicases
117631490
Pre-60S particles
117631490
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
AAA_22
DPC1
Motif
Other DBs
NCBI-GeneID:
117631490
NCBI-ProteinID:
XP_034220573
LinkDB
All DBs
Position
6:6822842..6827048
Genome browser
AA seq
584 aa
AA seq
DB search
MTDPIRCASPDDETKKTTHKRKRGNKPSEESEPRNPYQAQQNEKEEKGEGDDDNKKEKKT
KKMKGEEAEANAEGVEEENKRKKKVKSGGGSGIMSRDSFGSLNLSANTFKAIQELNFQYM
TQIQARAIPSLLIGKDVLGAARTGSGKTLAFLIPALELLYHTKFTPRNGTGVVVICPTRE
LAIQTYAVAKDLLKYHSHTVDLVIGGAARRGEAERLVKGVNLLVATPGRLLDHLQNTKGF
IYKNLKCLIIDEADRILEANFEEEMKQIIKLLPKKRQTALFSATQTTKVQDLARLSLKEH
HLIDVDGGRTKVTNEGLKQGYFIVPSEERFILLYSFLVATRSKKVMVFFSSCNSVKFHSD
LLRYVNVDCFDIHGKQKQQRRTKTFFDFCKAEKGILLCTDVAARGLDIPAVDVIVQFDPP
DDPKEYIHRVGRTARGEGGKGKAFLFLIPEEMQFIRYLKAEKVPVEEQQINKNKLKNVQS
QLEKMVEGNYYLRQAAKEAYKSYLLAYNSHSMKDIFNVHRLDLQAVAASFCFSSLPKVNL
NLNSSASKFRKKMHKVGGSRNGFSESNPYGMQKGRDEIRQFVKH
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgacagacccaatccgttgcgcatctccggacgacgagacgaagaagacgacgcacaag
agaaagagagggaataaaccgtcggaagaatcagagcctcgaaacccttatcaggcccaa
caaaacgaaaaagaggagaaaggagaaggtgatgatgacaataagaaggagaagaagacg
aagaaaatgaagggagaggaagcagaggccaatgcagagggggtggaggaggagaataag
aggaagaagaaggtcaaaagtggtggagggtctgggattatgagcagagactcctttggt
tcattgaatttgtctgccaacactttcaaggccattcaggaactcaactttcagtatatg
actcagattcaagccagagcaatcccatcactattgatcggaaaagatgtcctcggagct
gctaggacaggatccgggaagactcttgcttttcttataccagctttggagttgttatat
cacacaaagtttactcctcgtaatggaacgggtgttgttgtcatttgcccaacacgggaa
cttgcaattcagacctatgccgtggcaaaggaccttctgaagtaccactcacatactgtt
gacttggttatcggtggtgcagctaggagaggtgaagcagaacgtcttgtaaaaggagta
aatctattggttgcaacccctggtcgacttcttgaccatctccagaataccaagggattc
atatataagaacttgaagtgcctcataattgatgaagctgataggattttggaagcaaac
tttgaggaagaaatgaaacagattattaagcttctacccaagaaaaggcaaacagcttta
ttttcagcaacccaaactacgaaggttcaagatcttgctagattgtcattgaaagaacat
cacttgattgatgttgatggtggaagaactaaggtcaccaatgaagggctgaaacaaggc
tattttattgtgcctagtgaggagagatttattctcctatattcttttctggtggcgact
cggtctaagaaagtgatggtcttcttctcttcttgtaactcagtcaaattccactctgac
cttcttagatacgttaatgtggattgctttgatatccatggaaagcaaaagcagcagagg
aggacaaaaactttttttgacttctgcaaagcagagaaaggaatcttactctgtactgat
gttgctgctcgtggcctggatattcctgctgtggacgtgattgtgcagtttgatcctcca
gatgatcccaaggaatatatccacagagttggtcgaacagctcgaggtgaaggtggaaaa
ggaaaggcatttcttttcctcatacccgaagagatgcaatttattcgctatttgaaggct
gaaaaagtccccgttgaagagcaacaaattaataagaataagctgaaaaatgtgcagtct
caactggaaaagatggttgagggcaactactatctgcgccaagcggcaaaagaagcatat
aaatcttatctattagcgtataattcacactctatgaaggacatctttaatgttcaccgt
ctcgatctgcaggcggtcgcagcttcattttgcttttcaagtcttcccaaggtgaatttg
aacttaaacagcagtgcatcaaagttccggaagaagatgcacaaagtaggaggaagtaga
aatggattcagcgagagcaatccttatggaatgcaaaaaggtagagatgaaattcgacaa
tttgtgaagcattaa
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