Prunus dulcis (almond): 117631848
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Entry
117631848 CDS
T07328
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdul03009
]
117631848
Ribosome biogenesis [BR:
pdul03009
]
Eukaryotic type
90S particles
Other 90S particles
117631848
Pre-60S particles
Other pre-60S particles
117631848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_ECM29
DsbG_N
ocr
Motif
Other DBs
NCBI-GeneID:
117631848
NCBI-ProteinID:
XP_034221063
LinkDB
All DBs
Position
6:19846835..19854956
Genome browser
AA seq
1300 aa
AA seq
DB search
MADIEMDDAYTLTLSEDEDICASILARFSNSTREDHRHLCAAIGAMTQELKDENLPLTPV
AYLGFTCSSLDGLSSQAEPSAHVIDALLTLLSIVFRKVSPAILVKKSEFLLELLARVLRS
SSLTVGAALSGLKCISHLLIIRCRVNWSDVSSVYGFLLSFITDSRPKVRRQSSLCLRDVL
QNFQGTPLLSPASEGVTNLFERFLLLAGGSNADAGEGPKGAQEVLYVLDALKECLFHISI
KYKTAVLKYYKTLLALQQPLVTKRITDSLNILCLNPSTDVSPEVLLDLLCSLALSVSTNE
TSVDGMTVTARLLGNGMAKIYSLNRQICIVKLPIVFNALRDVLASEHEEAIHAAVHTFKT
LIHACIDESLIKQGVDQIVMNANLDARKSGPTIIEKVCATIESLLGYHYAGVWDLAVQVV
SVMFDKLGVYSSYFMRGALKILEEMAKLSNEDFPFRKQLHECLGSALVAMGPETFLGLLP
LNLEAEDPSQVNVWLFPILKQYTIGARLSFFTESILGMVQTMKDKSRELESQGRIFSSRS
TDAFVHALWSLLPSFCNYASDTAESFNDLEQALCSALQDEPEIRGIICLSLQILVQQNKK
IVGEVNDLSDSEVGSARHRAVANYTPQVTADNLSVLKSSACKLLLVLSGVFLNTTKDDAG
CLQSTIGEFASIADTEAVSALFQSTMLKLLMVIKRARKAQSYRDCNSKRAQLFDLTVSLL
PGLNADEINVLFGEIKSALQDDEGLIQKKAYKVLSIILRDCDRFLSSNSSKLKELPESSN
SSKLKELPESSNSSKLKELPESSKSSKLDELVDIMIEVQPCHSSAKRHRLDCLYLLVAHV
LKSDTKQRRDDIIRFLTEIVLALKEANKKTRNRAYDILIQIGHAYGDEEKGGKRDDLLEF
FYMVAGGLAGETPHMISAAMKALARLAYEFSDLVSTASNLLPSTFLLLQRKNKEIIKANL
GLLKVLVAKSQTEGLQLHLKSLVEGLLKWQDATKTHFKAKVKLLLEMLVRKCGLDAVKAV
VPQEHIKLLNNIRKIKERKEWKLGSNSEEARSQVSKATASRLSRWNHKKVFSDFDDEETE
NSDTDYMDAKTVAGRRGKASSQLKSKASSLRRTNKNLLDQLEDEPLDLLDRQRTRSALRS
FENLKRKMEWDDGPEIDSDGRLIIRDEAESYKKKPSEPDSDARSESGSYLSANSKKTQKR
RKTSESGWATTGKEYGSKKAGGDLKRKDKLEPYAYWPLDRKMMSRRPEHRAAARKGISSV
VKMTKRLEGKSVSSILSTKGLKFKNKSRVQKKGGSKRKSR
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggcagacatcgaaatggacgacgcctacactctcaccctgagcgaagacgaagacatc
tgcgcctcaatcctcgcccgcttcagcaactccacgcgcgaggaccaccgccacctctgc
gcagccataggcgccatgactcaggagctcaaagacgagaacctccctttgactcccgtc
gcctacttaggcttcacgtgctcttctctcgacgggctctcctcccaggccgagccttcc
gctcacgtgattgacgccctcctcacacttctctccattgtctttcgaaaagtgtcgccc
gcaattctcgtgaagaagtccgagttcctgttggagctcttggcccgtgttctgcggtct
tcgtctttgacggtgggcgccgcactctcgggattgaaatgcatatcgcatctgctcatc
atcagatgccgtgtcaactggtctgatgtgtcttcagtgtatggcttcttattgagcttt
attaccgattcccgccctaaggtgagaagacaatcaagtttgtgtcttcgtgatgtgctg
caaaattttcaaggaacaccgctgctctctcctgcgagtgaaggggttactaacttattt
gaaaggtttcttctgcttgccggtgggtcaaatgcagatgctggtgaaggacccaaggga
gctcaggaggtcttgtatgttttggatgctttgaaagagtgtctttttcatatatcgatc
aagtacaaaactgccgtcctcaagtactacaaaactcttttggcactgcaacaaccactt
gttacgaagcgcataacagatagtttgaatatactttgtctcaatccatctacagatgtt
tctcctgaagtgttgctcgatctgttatgctcattagctctttctgtctccacaaatgag
acatctgtcgatgggatgacagtcacagctcgcttgcttggtaatggaatggccaaaatt
tattccctcaataggcagatatgcatagttaaactccctattgtattcaatgcactcaga
gatgtattggcatctgagcatgaagaggccatacacgcagcagtgcatacatttaagact
ctcattcatgcttgcattgatgaaagcttgatcaaacagggagttgaccagattgtaatg
aatgcaaatctggatgcaaggaagtctgggccaactataattgaaaaagtttgtgctact
attgaaagcttgcttggttatcactacgctggtgtctgggaccttgcagtccaagttgtt
tcagtaatgttcgataaattaggggtatattcttcttatttcatgaggggtgcgctcaag
attttggaagagatggcgaagttatccaatgaagatttccctttcaggaaacagttgcat
gaatgccttggatcggctcttgttgcaatgggacctgaaacatttttaggtcttctacct
cttaatttggaggctgaagacccaagtcaggtgaatgtttggctctttccgatactgaag
cagtatactattggtgcacgtttgagcttctttacagagtcaattttgggtatggttcaa
acgatgaaggacaaatccagagagctcgagtcacaaggacgtattttttcatcaaggagc
acggacgcatttgtacatgctttgtggtcgttattaccttcattttgcaactacgcttct
gatactgctgaaagtttcaacgatctagaacaagccttgtgcagtgcccttcaggatgaa
cctgagattcgcggaataatatgcttgagcttgcagattcttgttcaacaaaataagaaa
attgttggagaagtgaatgatctgtctgatagtgaagtaggtagtgccagacacagagct
gttgctaattatacccctcaggttacagcagacaacttgagcgtgctcaagtcatctgct
tgcaagttactgcttgttctatcaggtgtcttcttgaataccacaaaagatgatgcgggc
tgtttgcagtccacaattggtgagtttgcttcaatagcagatacagaagctgtatcagcg
cttttccaaagtacaatgctgaagcttttaatggttattaaaagggctaggaaagcacaa
agttatagagattgtaattccaagcgggcacaactatttgacttgacagtttcactttta
cctggtttaaatgctgatgagattaatgttcttttcggagaaataaagagtgcattacag
gatgatgaaggtttgatacaaaagaaggcatataaagttctttcaatcattctcagggac
tgtgataggtttctttcatcgaattcttcgaaactcaaggaattgcctgaatcatcgaat
tcatcgaagctcaaggaattgcctgaatcatcaaattcatcgaagctcaaggaattgcct
gaatcgtcaaaatcatcgaagctcgatgaattggttgacattatgattgaagtgcagccc
tgccattcttcagctaaacggcacagacttgactgcttgtacctcctagtagcccatgtt
ttaaagagcgacacaaagcagaggcgggatgacattataagattcctgacagaaatagtt
cttgcacttaaagaggctaacaaaaagacaagaaatagagcttatgatattcttatccaa
attgggcatgcttatggtgatgaggagaaaggcgggaagagagatgacctgttggaattt
ttttacatggtagctgggggcctagctggtgaaactcctcatatgatcagtgctgcaatg
aaggccttagctcggttggcttatgagttttctgatcttgtttcaaccgctagcaatttg
cttccgtccacatttctcctcctccagagaaagaacaaagaaataattaaagctaattta
ggtttgttgaaggtattagtggccaaatcacaaaccgaggggttgcaattgcacttgaaa
agcttggtggaaggcttgctgaagtggcaagatgctactaaaacccacttcaaagccaag
gttaagcttcttctagaaatgctagtcaggaaatgtgggcttgatgctgttaaggctgtg
gtgcctcaagaacatataaaactacttaacaacatacggaagatcaaggaacggaaagag
tggaaactgggttctaactcggaggaagctagatctcaagtttccaaagcaactgcatcc
aggctgagcaggtggaatcataagaaagtattttctgattttgatgatgaagaaactgag
aatagtgatacagattatatggatgccaaaacagttgcgggcagacgtggcaaggcttct
tcgcagctaaaatccaaagcatcctcattacgaagaacaaataagaacttgcttgatcaa
ctagaagatgagccacttgacttgcttgaccggcagagaacaaggtcagcgcttagatca
tttgagaatttaaagcgaaaaatggagtgggatgatgggccagagatagactctgatggg
cgcttaataattcgtgacgaagcagaatcgtacaagaaaaagccatccgaacctgattca
gatgcaagaagtgaatcgggcagttacttgtctgcaaactcaaagaaaacacagaagcgg
aggaagacatcggagtcagggtgggctaccaccggcaaagagtacggcagcaagaaggct
ggtggggatttgaagaggaaggacaagctcgaaccgtatgcgtattggccacttgatcgg
aagatgatgagccgtaggccagagcatagggcagctgcaagaaaagggatatcgagtgtg
gtgaagatgacaaagaggctggaagggaagagtgtctcaagtattctctccaccaaaggc
ttgaagtttaagaataaaagtagggttcagaagaaaggaggcagcaagaggaaaagtagg
tga
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